Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 EOGT-210ENST00000615922 1931 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 MAPK10-349ENST00000641767 3661 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 SNRPEP3-201ENST00000338402 276 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 RNU6-500P-201ENST00000362349 107 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 SNORD113.2-201ENST00000364166 89 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 RNU1-63P-201ENST00000383902 164 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 RNU6-921P-201ENST00000384361 107 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 MT-TH-201ENST00000387441 69 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 GLULP6-201ENST00000399502 913 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 RPS16P5-201ENST00000406501 404 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 NPM1P11-201ENST00000417106 855 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 UQCRBP1-201ENST00000421129 336 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 RAD23BP1-201ENST00000421404 1227 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC004448.2-201ENST00000422360 586 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 SDCBPP2-201ENST00000424643 885 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AL117351.1-201ENST00000438864 766 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 MTCO1P48-201ENST00000448024 1096 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 TPTE2P5-203ENST00000458118 728 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 RAP1BP2-201ENST00000478270 544 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC083829.1-201ENST00000503756 657 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 RNA5SP446-201ENST00000515955 82 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 RNU6-583P-201ENST00000516012 92 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 OR7K1P-201ENST00000546439 926 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC023161.2-201ENST00000551218 780 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC074029.1-201ENST00000552531 1044 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC107982.3-201ENST00000584957 985 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 BPIFA4P-203ENST00000603168 689 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 MIR6780A-201ENST00000615089 68 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC140113.4-201ENST00000622087 222 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC079228.1-201ENST00000624774 1049 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC127502.3-201ENST00000636170 1206 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AC125257.1-201ENST00000560400 2930 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 MTCO1P14-201ENST00000441695 1559 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 LINC00622-201ENST00000562811 1570 ntBASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP3Q96JB5 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 ERCC6-202ENST00000374127 1782 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 MTND5P24-201ENST00000438892 1767 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 CPHL1P-201ENST00000461341 3407 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 RNU6-441P-201ENST00000384545 106 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 SNRPEP2-201ENST00000397592 279 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AL603766.1-201ENST00000407763 664 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 MTCYBP38-201ENST00000417160 1123 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 NIPA2P1-201ENST00000426223 976 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 RWDD4P2-201ENST00000426392 563 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC008065.1-201ENST00000428525 348 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC092427.1-201ENST00000439177 601 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 RPL26P28-201ENST00000451325 435 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 VN1R32P-201ENST00000452234 905 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms