Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MIR133B-201ENST00000362210 119 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 RNA5SP507-201ENST00000363603 121 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-702P-201ENST00000364982 107 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 SNORA16A-201ENST00000384342 137 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 RNA5SP339-201ENST00000390987 122 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 RPL23AP32-201ENST00000395315 459 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AL645927.1-201ENST00000396783 406 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AL136116.1-201ENST00000403591 381 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 MIR320C1-201ENST00000408566 88 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC092634.6-201ENST00000418558 192 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC105399.1-202ENST00000447303 205 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 RPS23P9-201ENST00000448848 438 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 TCEA1P1-201ENST00000449716 880 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AL035090.1-201ENST00000454835 332 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 U8.20-201ENST00000459445 131 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC111193.1-201ENST00000504097 155 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 IGHV3-63-201ENST00000518422 341 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 HMGB1P23-201ENST00000518743 568 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 FAM106CP-201ENST00000582212 507 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC060780.2-201ENST00000589047 198 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC007938.3-201ENST00000604965 623 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AP000654.2-201ENST00000605633 586 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 NANOGP3-201ENST00000605855 286 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 RNA5SP439-201ENST00000617595 124 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 AC093671.1-201ENST00000624981 2929 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 ERCC6-202ENST00000374127 1782 ntBASIC5.78□□□□□ -1.48
SHKBP1Q8TBC3 OR4G1P-203ENST00000641984 1631 ntBASIC5.77□□□□□ -1.48
SHKBP1Q8TBC3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 NUP58P1-201ENST00000502546 1738 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AC007938.2-201ENST00000604666 2634 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 U8.4-201ENST00000363626 134 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 MIR506-201ENST00000384998 124 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AL009179.1-201ENST00000406085 265 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 MIR1303-201ENST00000408625 86 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 RNU2-3P-201ENST00000410144 191 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AC073264.1-201ENST00000411508 416 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 BNIP3P2-201ENST00000441221 577 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 RPL32P28-201ENST00000443577 397 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 RN7SL329P-201ENST00000467740 299 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 RN7SL447P-201ENST00000494711 245 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 EIF4EP3-201ENST00000498782 656 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 RNU6-988P-201ENST00000519081 107 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 SUB1P1-201ENST00000524415 382 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 Z84480.1-201ENST00000605131 311 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AC113194.1-201ENST00000606037 500 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AL133481.2-203ENST00000607558 139 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AC135068.12-201ENST00000637370 931 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 CCT8P1-201ENST00000413611 1657 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AL355488.2-201ENST00000609909 2850 ntBASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHKBP1Q8TBC3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms