Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 UBE2NP1-201ENST00000545592 458 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC025260.1-201ENST00000548858 430 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 ATP5F1P7-201ENST00000567330 760 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 HNRNPCP4-201ENST00000571636 900 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC079089.3-201ENST00000603094 673 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC017083.3-201ENST00000609955 700 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC138749.5-201ENST00000611461 208 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC100793.4-201ENST00000613683 429 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC013476.2-201ENST00000614456 459 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AL359314.1-201ENST00000616913 261 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC121761.2-201ENST00000617300 689 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SYNE4Q8N205 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC006484.1-201ENST00000435086 1884 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AP005435.3-201ENST00000531260 3198 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SYNE4Q8N205 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 PROS2P-201ENST00000474651 1951 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC133552.1-201ENST00000569988 4007 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SYNE4Q8N205 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SYNE4Q8N205 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SYNE4Q8N205 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 IL6STP1-201ENST00000346911 1020 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 RNU11-4P-201ENST00000391149 133 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 RNU6ATAC-201ENST00000408749 126 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 SNORA74C-2-201ENST00000411179 201 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 MTND1P21-201ENST00000412991 285 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SYNE4Q8N205 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC091390.3-201ENST00000426478 338 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 AL139415.2-201ENST00000431968 163 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 RPS26P2-201ENST00000440331 348 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 KATNBL1P6-201ENST00000453433 915 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 RPL23AP81-201ENST00000455252 467 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 ARL4AP1-201ENST00000503220 705 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AL352979.3-201ENST00000553515 247 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 CYP2C60P-201ENST00000566088 139 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 RPL23AP97-201ENST00000568955 471 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC074051.3-201ENST00000570238 358 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC008739.3-201ENST00000603262 127 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC012468.1-201ENST00000604888 430 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC018714.1-201ENST00000605028 208 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 CR392039.5-201ENST00000623201 510 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC124312.6-202ENST00000623624 418 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SYNE4Q8N205 MIR4278-201ENST00000636094 69 ntBASIC5.31□□□□□ -1.56
SYNE4Q8N205 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SYNE4Q8N205 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SYNE4Q8N205 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
SYNE4Q8N205 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SYNE4Q8N205 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SYNE4Q8N205 MTND4P31-201ENST00000425607 1343 ntBASIC5.3□□□□□ -1.56
SYNE4Q8N205 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SYNE4Q8N205 SMG1P4-204ENST00000523028 4131 ntBASIC5.3□□□□□ -1.56
SYNE4Q8N205 SNORA63.1-201ENST00000362493 131 ntBASIC5.3□□□□□ -1.56
SYNE4Q8N205 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SYNE4Q8N205 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SYNE4Q8N205 SNORD96B-201ENST00000386148 79 ntBASIC5.3□□□□□ -1.56
SYNE4Q8N205 ATP5F1P4-201ENST00000397288 746 ntBASIC5.3□□□□□ -1.56
SYNE4Q8N205 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.3□□□□□ -1.56
SYNE4Q8N205 AP000357.1-201ENST00000409926 1165 ntBASIC5.3□□□□□ -1.56
SYNE4Q8N205 MIR1911-201ENST00000410783 80 ntBASIC5.3□□□□□ -1.56
SYNE4Q8N205 RPL7P8-201ENST00000411964 730 ntBASIC5.3□□□□□ -1.56
SYNE4Q8N205 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.3□□□□□ -1.56
SYNE4Q8N205 CDK8P2-201ENST00000415020 547 ntBASIC5.3□□□□□ -1.56
SYNE4Q8N205 TCEA1P4-201ENST00000415066 844 ntBASIC5.3□□□□□ -1.56
SYNE4Q8N205 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms