Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AC139769.1-204ENST00000472297 1931 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 ZNF37BP-203ENST00000452306 1352 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 IL6STP1-201ENST00000346911 1020 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 RNU1-14P-201ENST00000362759 152 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 RNA5SP36-201ENST00000410197 133 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 RNU2-28P-201ENST00000410457 189 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 RN7SKP235-201ENST00000410662 305 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC073264.1-201ENST00000411508 416 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AL008987.1-201ENST00000415528 237 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 CRYBB2P1-203ENST00000415709 538 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC108032.1-201ENST00000416706 207 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 OR8F1P-201ENST00000425243 930 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AL157831.1-201ENST00000426134 473 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC018644.1-201ENST00000429934 551 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 MTATP6P17-201ENST00000431030 672 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 ATP1B1P1-201ENST00000509767 915 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 FTH1P21-201ENST00000512179 511 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 IGKV2-23-201ENST00000518729 323 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 ZNF705CP-201ENST00000530515 889 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 OR4A12P-201ENST00000530847 918 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 CYCSP28-201ENST00000534284 321 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC009712.1-201ENST00000564938 316 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC007566.2-201ENST00000603642 413 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 COX6CP4-201ENST00000605798 228 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AL008729.2-201ENST00000606393 473 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC092106.3-201ENST00000611308 722 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 FAM27D1-201ENST00000612308 341 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC131238.1-201ENST00000617135 328 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC244100.1-202ENST00000621554 382 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC010608.2-201ENST00000624830 470 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 MIR4278-201ENST00000636094 69 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 AC092435.4-201ENST00000623012 4159 ntBASIC4.69□□□□□ -1.66
HERC6Q8IVU3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.69□□□□□ -1.66
HERC6Q8IVU3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC106871.1-201ENST00000568324 3102 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC117529.2-201ENST00000512159 2068 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 OR4A15-201ENST00000314706 1035 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 ENSAP1-201ENST00000392855 326 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 RPS24P12-201ENST00000402084 394 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC004987.3-201ENST00000413879 771 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC004448.2-201ENST00000422360 586 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 SDCBPP2-201ENST00000424643 885 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 UBE2V1P3-201ENST00000439651 417 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 EXTL2P1-201ENST00000446218 416 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.68□□□□□ -1.66
HERC6Q8IVU3 AL592156.1-201ENST00000508758 304 ntBASIC4.68□□□□□ -1.66
HERC6Q8IVU3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms