Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 Y_RNA.493-201ENST00000384422 102 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 SNORD116-12-201ENST00000384468 92 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AL121972.1-201ENST00000402023 252 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 OR4K6P-201ENST00000416478 897 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC108032.1-201ENST00000416706 207 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC092634.6-201ENST00000418558 192 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AL035410.1-201ENST00000427409 427 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 COX6B1P7-201ENST00000430845 235 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AL034418.1-201ENST00000448675 860 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC079776.3-201ENST00000450665 370 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC104073.1-201ENST00000451988 151 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 SNRPGP5-201ENST00000456003 220 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC010307.1-201ENST00000467206 836 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC006517.1-201ENST00000480485 328 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC013828.1-201ENST00000481845 158 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 RPS27AP13-201ENST00000498403 237 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC107954.1-201ENST00000565906 727 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC005412.1-201ENST00000580812 1049 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 IGHV3-29-201ENST00000604817 344 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC092953.2-201ENST00000608000 699 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 MIR4727-201ENST00000622232 55 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC010608.3-201ENST00000625048 527 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
PRPF39Q86UA1 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
PRPF39Q86UA1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AL133412.1-201ENST00000380194 2992 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 RNU6-251P-201ENST00000363235 104 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 ZNF602P-201ENST00000405929 924 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 RN7SKP27-201ENST00000410684 333 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 Z75741.2-201ENST00000417272 1167 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 MTND2P16-201ENST00000419987 799 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 MTCO1P48-201ENST00000448024 1096 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC099522.1-202ENST00000514718 367 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 MIR4509-3-201ENST00000578671 94 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 MIR4509-2-201ENST00000583920 94 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC006116.5-201ENST00000591936 559 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AL109618.2-201ENST00000605527 211 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AL354976.1-201ENST00000613843 387 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC090116.1-201ENST00000615679 446 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 MIR4509-1-201ENST00000618224 94 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC138649.5-201ENST00000637456 137 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.27□□□□□ -1.73
PRPF39Q86UA1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF39Q86UA1 AC018529.3-201ENST00000624212 2254 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 OR11H5P-202ENST00000641612 1325 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF39Q86UA1 AC018555.1-201ENST00000567548 1980 ntBASIC4.26□□□□□ -1.73
PRPF39Q86UA1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms