Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS13CQ709C8 AL590103.1-201ENST00000434488 307 ntBASIC2.37□□□□□ -2.03
VPS13CQ709C8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.37□□□□□ -2.03
VPS13CQ709C8 AC010468.1-201ENST00000461022 817 ntBASIC2.37□□□□□ -2.03
VPS13CQ709C8 AP003102.1-201ENST00000525638 661 ntBASIC2.37□□□□□ -2.03
VPS13CQ709C8 AC074276.2-201ENST00000619891 348 ntBASIC2.37□□□□□ -2.03
VPS13CQ709C8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS13CQ709C8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13CQ709C8 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
VPS13CQ709C8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS13CQ709C8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VPS13CQ709C8 RPS4XP7-201ENST00000406274 780 ntBASIC2.37□□□□□ -2.03
VPS13CQ709C8 AL450338.1-201ENST00000407987 512 ntBASIC2.37□□□□□ -2.03
VPS13CQ709C8 ANP32BP2-201ENST00000454525 545 ntBASIC2.37□□□□□ -2.03
VPS13CQ709C8 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.37□□□□□ -2.03
VPS13CQ709C8 AC007954.1-201ENST00000554198 494 ntBASIC2.37□□□□□ -2.03
VPS13CQ709C8 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
VPS13CQ709C8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13CQ709C8 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13CQ709C8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 OR2X1P-201ENST00000421144 687 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 UBE2D3P1-201ENST00000436669 444 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 RN7SKP283-201ENST00000517197 270 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 AL158827.2-201ENST00000602494 330 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 AC009948.4-201ENST00000604692 675 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 AL691447.3-201ENST00000635020 330 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VPS13CQ709C8 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 NPM1P24-201ENST00000428039 894 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 EEF1B2P7-201ENST00000451177 676 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 ACTG1P13-201ENST00000486987 1043 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 RNA5SP24-201ENST00000516478 95 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 BNIP3P8-201ENST00000597863 560 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 AC010680.4-201ENST00000605334 543 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS13CQ709C8 DMD-211ENST00000378707 7410 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 RMST-202ENST00000541282 2099 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 RPL23AP71-201ENST00000470966 469 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 RPS20P22-201ENST00000473700 357 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 RFPL4AP3-201ENST00000515267 345 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 AL031595.2-201ENST00000624215 19071 ntBASIC2.36□□□□□ -2.03
VPS13CQ709C8 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
VPS13CQ709C8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS13CQ709C8 AL161781.1-201ENST00000354277 403 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 MRPS18BP2-201ENST00000434310 759 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 AC078785.3-201ENST00000476607 425 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 RN7SL499P-201ENST00000481141 276 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 AC117522.3-201ENST00000507974 584 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 AC006989.1-201ENST00000427212 131 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 RPL9P32-201ENST00000464118 620 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 SYT14P1-201ENST00000481459 721 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 GAPDHP39-201ENST00000481866 979 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 MIR4727-201ENST00000622232 55 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13CQ709C8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13CQ709C8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13CQ709C8 TAB3P1-202ENST00000452645 1634 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 AC087499.2-201ENST00000432861 149 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 NIPA2P5-201ENST00000452282 464 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 AC010401.1-201ENST00000463867 348 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 AC018797.3-201ENST00000513388 1241 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 TCP11X3P-202ENST00000514289 1254 ntBASIC2.35□□□□□ -2.03
VPS13CQ709C8 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS13CQ709C8 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13CQ709C8 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13CQ709C8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS13CQ709C8 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.34□□□□□ -2.03
VPS13CQ709C8 RPS29P6-201ENST00000438196 145 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms