Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 RNU1-43P-201ENST00000365052 165 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 MT-TP-201ENST00000387461 68 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 AP003170.5-201ENST00000397185 335 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 AL049697.2-201ENST00000403708 294 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 RPL31P52-201ENST00000407532 367 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 RPL37P10-201ENST00000412884 288 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 AC074085.1-201ENST00000413598 418 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 AC018865.2-201ENST00000423631 129 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 GAPDHP14-201ENST00000450472 937 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 RPL7P6-201ENST00000480903 738 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 RNU6-864P-201ENST00000516256 108 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 RPL7P20-201ENST00000520308 745 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 AC068831.4-201ENST00000556118 109 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 NANOGP3-201ENST00000605855 286 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 AC109583.2-201ENST00000617367 129 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 AL049641.1-201ENST00000441055 1948 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
RC3H1Q5TC82 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
RC3H1Q5TC82 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
RC3H1Q5TC82 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
RC3H1Q5TC82 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
RC3H1Q5TC82 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 AC105074.1-201ENST00000623380 3095 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 RNU6-1188P-201ENST00000363795 107 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 Y_RNA.373-201ENST00000365600 103 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 RNU6-730P-201ENST00000383954 104 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 MIR1-2-201ENST00000384961 85 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 SNORD37.1-201ENST00000390968 65 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 RN7SKP158-201ENST00000410453 326 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 AL353777.1-201ENST00000425552 326 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 RPL34P6-201ENST00000432390 345 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 EIF4EBP2P1-201ENST00000450009 343 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 RPL37P3-201ENST00000456825 293 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 AC128713.1-201ENST00000471495 306 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 VN1R104P-201ENST00000505115 1009 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 RNU4-29P-201ENST00000515943 174 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 AC090572.1-201ENST00000519251 160 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 AP001922.4-201ENST00000526967 290 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 AP000827.1-201ENST00000527814 258 ntBASIC7.08□□□□□ -1.28
RC3H1Q5TC82 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RC3H1Q5TC82 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AC046144.1-201ENST00000478559 1853 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RC3H1Q5TC82 RNA5SP105-201ENST00000391123 113 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 MTCO2P33-201ENST00000402100 465 ntBASIC7.07□□□□□ -1.28
RC3H1Q5TC82 AL009179.1-201ENST00000406085 265 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms