Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC131159.1-201ENST00000621854 213 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AP001784.1-201ENST00000624107 428 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC231657.1-201ENST00000624313 397 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC38Q502W7 A2MP1-204ENST00000566278 4130 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 MTCO1P23-201ENST00000415223 1526 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC38Q502W7 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC38Q502W7 MIR124-3-201ENST00000384866 87 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AL355379.1-201ENST00000405542 640 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 RPL37P18-201ENST00000411602 243 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 RAP1BP1-201ENST00000412709 553 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC073335.1-201ENST00000427776 363 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC005154.2-201ENST00000438110 379 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC006466.1-201ENST00000438721 289 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 HIGD1AP8-201ENST00000453927 274 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC091685.2-201ENST00000454924 864 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 RPL7P22-201ENST00000466005 733 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC090013.1-201ENST00000485147 480 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC083829.1-201ENST00000503756 657 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC093281.2-201ENST00000510153 597 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 MTCO3P44-201ENST00000510977 541 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC006499.2-201ENST00000513470 337 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 RNU6-1129P-201ENST00000515964 104 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 RNA5SP497-201ENST00000516081 97 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 RNU4-60P-201ENST00000517239 135 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC104986.1-201ENST00000517978 436 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 DEFB131D-201ENST00000526803 184 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AP001922.4-201ENST00000526967 290 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 UBE2NP1-201ENST00000545592 458 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 ELOCP32-201ENST00000548625 324 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 EDDM3DP-201ENST00000554692 434 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC105129.1-201ENST00000560250 297 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 MIR3934-201ENST00000579806 107 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 MIR4999-201ENST00000585029 91 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC008759.1-201ENST00000589783 983 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AL512782.1-201ENST00000603093 364 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 AL049539.1-201ENST00000611964 459 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 MIR6853-201ENST00000619642 74 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC006065.5-201ENST00000623427 349 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC010928.1-201ENST00000592477 1447 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC38Q502W7 AL391684.1-202ENST00000641293 1636 ntBASIC4.68□□□□□ -1.66
CCDC38Q502W7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC38Q502W7 AC097504.1-201ENST00000515103 2415 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 MTCO1P14-201ENST00000441695 1559 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC38Q502W7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AC016588.2-201ENST00000632484 3021 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 AL590240.1-201ENST00000334118 313 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC38Q502W7 SNORA4.1-201ENST00000364263 144 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 SNORD82-201ENST00000365530 70 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 MT-TC-201ENST00000387405 66 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 HMGB1P17-201ENST00000403495 628 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 RN7SKP100-201ENST00000411258 284 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AC140479.3-201ENST00000418944 1126 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 AL049610.1-201ENST00000423374 372 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 RWDD4P2-201ENST00000426392 563 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC38Q502W7 USP9YP34-201ENST00000453983 808 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 ISCUP1-201ENST00000454451 448 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 USP9YP10-201ENST00000454868 628 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 ATG12P2-201ENST00000456830 416 ntBASIC4.67□□□□□ -1.66
CCDC38Q502W7 AC147055.4-201ENST00000504399 745 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms