Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SIX1Q15475 RNU6-353P-201ENST00000364266 108 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX1Q15475 AP002088.1-201ENST00000382740 395 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 RNU6-549P-201ENST00000384433 107 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 TAF13P2-201ENST00000416876 286 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC009302.1-201ENST00000417147 390 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC245054.1-201ENST00000420944 258 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC092634.2-201ENST00000428146 1010 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX1Q15475 AC122718.1-201ENST00000439448 744 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 PTGES3P1-201ENST00000439531 483 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC002542.1-201ENST00000440683 193 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 RPS26P30-201ENST00000443431 335 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AL592437.1-201ENST00000443781 492 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX1Q15475 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX1Q15475 AL009048.1-201ENST00000450437 298 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 DNAJC19P8-201ENST00000452887 259 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AL354710.1-201ENST00000453641 246 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC244505.3-201ENST00000454598 187 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX1Q15475 FAM133DP-201ENST00000464802 691 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC006511.1-201ENST00000470614 315 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AL035404.1-201ENST00000497982 568 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SIX1Q15475 AC008837.1-201ENST00000511513 412 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SIX1Q15475 RNU6-1231P-201ENST00000517185 103 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX1Q15475 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX1Q15475 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.74□□□□□ -1.81
SIX1Q15475 AC104417.1-201ENST00000523974 751 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 NDUFS5P6-201ENST00000529136 295 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX1Q15475 AC026333.2-201ENST00000542164 106 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 CYCSP30-201ENST00000546447 172 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX1Q15475 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX1Q15475 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.74□□□□□ -1.81
SIX1Q15475 RN7SL703P-201ENST00000578485 302 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AL160237.3-201ENST00000604114 1013 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC006077.1-201ENST00000604746 343 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC112220.2-201ENST00000605513 533 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC024060.1-201ENST00000607052 494 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC099676.1-201ENST00000608886 657 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AL161637.1-201ENST00000622380 412 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 AC074029.4-201ENST00000624796 1859 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX1Q15475 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.74□□□□□ -1.81
SIX1Q15475 BX649567.1-201ENST00000642071 1134 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SIX1Q15475 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX1Q15475 MTCO1P6-201ENST00000481192 1384 ntBASIC3.74□□□□□ -1.81
SIX1Q15475 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.74□□□□□ -1.81
SIX1Q15475 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX1Q15475 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 AC104446.1-201ENST00000613728 1321 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX1Q15475 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 MIR30E-201ENST00000362104 92 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 HSPD1P16-201ENST00000402302 394 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX1Q15475 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX1Q15475 RPL7P2-201ENST00000427639 268 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AL158071.1-201ENST00000430315 461 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX1Q15475 AL929288.2-201ENST00000446368 407 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AC005002.1-201ENST00000447458 540 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX1Q15475 AL359073.1-201ENST00000448036 403 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 MTND2P8-201ENST00000450555 1025 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AL162388.1-201ENST00000450912 352 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 APOOP2-201ENST00000461561 539 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AL133162.1-201ENST00000463228 453 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 RN7SL132P-201ENST00000478131 296 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AC023050.1-201ENST00000498198 304 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX1Q15475 AC110768.1-201ENST00000509222 400 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX1Q15475 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 MTND4LP31-201ENST00000514859 294 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX1Q15475 AC093853.1-201ENST00000515689 483 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX1Q15475 HMGB1P23-201ENST00000518743 568 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 IGKV2-36-201ENST00000519999 223 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX1Q15475 AL139174.1-201ENST00000531489 886 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX1Q15475 MTND1P24-201ENST00000552175 861 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 MIR5187-201ENST00000583479 76 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 MTCO2P2-201ENST00000591258 225 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AC022916.3-201ENST00000592961 742 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 BNIP3P4-201ENST00000604946 565 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms