Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX4Q06945 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SOX4Q06945 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX4Q06945 AL078621.3-201ENST00000623707 2042 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.81□□□□□ -1.48
SOX4Q06945 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
SOX4Q06945 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SOX4Q06945 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.8□□□□□ -1.48
SOX4Q06945 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX4Q06945 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.8□□□□□ -1.48
SOX4Q06945 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SOX4Q06945 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX4Q06945 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX4Q06945 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SOX4Q06945 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SOX4Q06945 RPL23P2-201ENST00000320371 421 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 RNU1-19P-201ENST00000363306 165 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 Y_RNA.133-201ENST00000363428 110 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 SNORA67-201ENST00000384423 137 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 DBIP1-201ENST00000401435 260 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 UQCRBP1-201ENST00000421129 336 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 AC007394.1-201ENST00000421941 531 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SOX4Q06945 RPS24P8-201ENST00000431490 402 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.8□□□□□ -1.48
SOX4Q06945 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.8□□□□□ -1.48
SOX4Q06945 GAPDHP25-201ENST00000447061 1001 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 snoU13.29-201ENST00000459370 104 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.8□□□□□ -1.48
SOX4Q06945 AC058823.1-201ENST00000485315 474 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 AC093270.2-201ENST00000486157 792 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 UBA52P3-201ENST00000491303 382 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 RN7SL808P-201ENST00000496066 299 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 AC093815.1-201ENST00000508637 280 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 KLHL2P1-201ENST00000508691 521 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.8□□□□□ -1.48
SOX4Q06945 SUB1P1-201ENST00000524415 382 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.8□□□□□ -1.48
SOX4Q06945 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.8□□□□□ -1.48
SOX4Q06945 HAUS8P1-201ENST00000549005 542 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.8□□□□□ -1.48
SOX4Q06945 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.8□□□□□ -1.48
SOX4Q06945 DNAJC8P1-201ENST00000554535 372 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.8□□□□□ -1.48
SOX4Q06945 MIR3118-1-201ENST00000581787 76 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX4Q06945 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX4Q06945 AC097504.1-201ENST00000515103 2415 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX4Q06945 AC083899.1-201ENST00000454465 3819 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
SOX4Q06945 AL355488.2-201ENST00000609909 2850 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX4Q06945 LARP1BP1-201ENST00000506036 1359 ntBASIC5.8□□□□□ -1.48
SOX4Q06945 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SOX4Q06945 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SOX4Q06945 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SOX4Q06945 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SOX4Q06945 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SOX4Q06945 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
SOX4Q06945 U8.4-201ENST00000363626 134 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 RNU1-43P-201ENST00000365052 165 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 RNU6-169P-201ENST00000365336 107 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 RNU6-108P-201ENST00000365558 107 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SOX4Q06945 DHFRP6-201ENST00000401776 268 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 DUTP5-201ENST00000406790 469 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.79□□□□□ -1.48
SOX4Q06945 TPMTP2-201ENST00000414372 726 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.79□□□□□ -1.48
SOX4Q06945 AC245054.2-201ENST00000415639 319 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 AC234782.4-201ENST00000417646 1048 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 AL645937.1-202ENST00000421799 937 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SOX4Q06945 DUTP6-201ENST00000425573 462 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.79□□□□□ -1.48
SOX4Q06945 RPL12P17-201ENST00000432393 498 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.79□□□□□ -1.48
SOX4Q06945 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.79□□□□□ -1.48
SOX4Q06945 AC104634.1-201ENST00000452720 462 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 PPP1R2P5-201ENST00000457256 603 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 RPS15AP1-201ENST00000457423 391 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 AC092754.1-201ENST00000472975 479 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.79□□□□□ -1.48
SOX4Q06945 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.79□□□□□ -1.48
SOX4Q06945 COX6CP8-201ENST00000522620 226 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 OR10G5P-201ENST00000532733 358 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.79□□□□□ -1.48
SOX4Q06945 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.79□□□□□ -1.48
SOX4Q06945 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.79□□□□□ -1.48
SOX4Q06945 AC008126.1-201ENST00000549019 480 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SOX4Q06945 HSPE1P3-201ENST00000559254 309 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 AC044860.2-201ENST00000561005 179 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 AC026464.5-201ENST00000562497 722 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 FRG2DP-202ENST00000566967 323 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.79□□□□□ -1.48
SOX4Q06945 AC100830.2-201ENST00000581636 240 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 MAGOH2P-202ENST00000584384 429 ntBASIC5.79□□□□□ -1.48
SOX4Q06945 MIR4443-201ENST00000585052 53 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms