Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MFSD8-233ENST00000641482 4860 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GABPAQ06546 MTND5P1-201ENST00000445440 1375 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
GABPAQ06546 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GABPAQ06546 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
GABPAQ06546 GCNT6-201ENST00000379591 934 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 OR52E6-202ENST00000379946 954 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.13□□□□□ -1.75
GABPAQ06546 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.13□□□□□ -1.75
GABPAQ06546 AC005326.1-201ENST00000429197 123 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 AC005019.1-201ENST00000436455 431 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 RPS7P5-201ENST00000441482 581 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.13□□□□□ -1.75
GABPAQ06546 AC068135.1-201ENST00000446164 246 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 AC133473.1-201ENST00000455173 299 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 AC023598.1-201ENST00000472521 361 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 AC104108.1-201ENST00000509930 412 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.13□□□□□ -1.75
GABPAQ06546 RNU2-27P-201ENST00000516185 142 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 COX6B1P6-201ENST00000522347 255 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.13□□□□□ -1.75
GABPAQ06546 NCAPGP2-201ENST00000557911 754 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.13□□□□□ -1.75
GABPAQ06546 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.13□□□□□ -1.75
GABPAQ06546 AL133457.1-201ENST00000564251 987 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.13□□□□□ -1.75
GABPAQ06546 TMF1P1-201ENST00000576058 373 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 AC017100.2-201ENST00000584628 355 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.13□□□□□ -1.75
GABPAQ06546 AC096586.1-201ENST00000610267 561 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.13□□□□□ -1.75
GABPAQ06546 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.13□□□□□ -1.75
GABPAQ06546 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.13□□□□□ -1.75
GABPAQ06546 SEC63P2-201ENST00000503863 1939 ntBASIC4.13□□□□□ -1.75
GABPAQ06546 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GABPAQ06546 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
GABPAQ06546 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.12□□□□□ -1.75
GABPAQ06546 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GABPAQ06546 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GABPAQ06546 RNU6-283P-201ENST00000364788 107 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 AC092745.2-202ENST00000411880 369 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 HSFY4P-201ENST00000415994 1181 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.12□□□□□ -1.75
GABPAQ06546 KRR1P1-201ENST00000419430 803 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 DEFB130D-201ENST00000426866 237 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.12□□□□□ -1.75
GABPAQ06546 RPL23AP83-201ENST00000434984 473 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 ELOCP11-201ENST00000436690 332 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 AF228730.2-201ENST00000438784 848 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.12□□□□□ -1.75
GABPAQ06546 AL158053.1-201ENST00000441503 453 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 ELOCP16-201ENST00000444494 332 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 DNAJC19P1-201ENST00000455312 319 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.12□□□□□ -1.75
GABPAQ06546 RPL21P13-201ENST00000488305 481 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 AC104629.1-201ENST00000494226 508 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
GABPAQ06546 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.12□□□□□ -1.75
GABPAQ06546 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.12□□□□□ -1.75
GABPAQ06546 AC112206.4-201ENST00000515142 405 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.12□□□□□ -1.75
GABPAQ06546 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
GABPAQ06546 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.12□□□□□ -1.75
GABPAQ06546 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.12□□□□□ -1.75
GABPAQ06546 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.12□□□□□ -1.75
GABPAQ06546 ATP5F1P7-201ENST00000567330 760 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 MIR3200-201ENST00000580767 85 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 AC067852.3-201ENST00000589177 561 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.12□□□□□ -1.75
GABPAQ06546 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.12□□□□□ -1.75
GABPAQ06546 AC068790.5-201ENST00000602741 355 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 AC115621.1-201ENST00000604653 858 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 AC016542.1-201ENST00000608259 493 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 AC021851.1-201ENST00000608537 1082 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 AP000943.4-201ENST00000622912 357 ntBASIC4.12□□□□□ -1.75
GABPAQ06546 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.12□□□□□ -1.75
GABPAQ06546 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.12□□□□□ -1.75
GABPAQ06546 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GABPAQ06546 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GABPAQ06546 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.12□□□□□ -1.75
GABPAQ06546 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GABPAQ06546 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.12□□□□□ -1.75
GABPAQ06546 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.11□□□□□ -1.75
GABPAQ06546 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GABPAQ06546 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.11□□□□□ -1.75
GABPAQ06546 MTND4P22-201ENST00000413116 1169 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.11□□□□□ -1.75
GABPAQ06546 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.11□□□□□ -1.75
GABPAQ06546 AL096803.2-201ENST00000450032 677 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.11□□□□□ -1.75
GABPAQ06546 ANP32BP2-201ENST00000454525 545 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 RN7SL93P-201ENST00000463035 293 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.11□□□□□ -1.75
GABPAQ06546 RN7SL601P-201ENST00000471221 293 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
GABPAQ06546 RPS6P4-201ENST00000494693 758 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.11□□□□□ -1.75
GABPAQ06546 NAMPTP2-201ENST00000505629 1115 ntBASIC4.11□□□□□ -1.75
GABPAQ06546 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms