Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 AC072039.2-201ENST00000608883 439 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 AC004908.3-201ENST00000610248 625 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 AC078883.4-201ENST00000623218 367 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 CU459211.1-201ENST00000635667 749 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 AC135352.1-201ENST00000506173 1418 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 OR4G11P-202ENST00000642116 1414 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.66□□□□□ -1.82
CX3CL1P78423 AC009951.1-201ENST00000623674 2614 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.66□□□□□ -1.82
CX3CL1P78423 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CX3CL1P78423 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CX3CL1P78423 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CX3CL1P78423 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.65□□□□□ -1.82
CX3CL1P78423 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CX3CL1P78423 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CX3CL1P78423 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CX3CL1P78423 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
CX3CL1P78423 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CX3CL1P78423 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CX3CL1P78423 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CX3CL1P78423 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.65□□□□□ -1.83
CX3CL1P78423 RNU6-339P-201ENST00000384310 107 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 RNU6-253P-201ENST00000384730 105 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.65□□□□□ -1.83
CX3CL1P78423 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.65□□□□□ -1.83
CX3CL1P78423 RPL31P1-201ENST00000398116 372 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 DHFRP6-201ENST00000401776 268 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AL121972.1-201ENST00000402023 252 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 HMGB1P17-201ENST00000403495 628 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AL049697.2-201ENST00000403708 294 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 RN7SKP106-201ENST00000410832 272 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 RNA5SP104-201ENST00000410989 118 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.65□□□□□ -1.83
CX3CL1P78423 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AL592293.2-201ENST00000422292 996 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AL049610.1-201ENST00000423374 372 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 Z74021.1-201ENST00000423610 407 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 MTND4P20-201ENST00000424125 869 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC005517.2-201ENST00000424673 553 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC234781.2-201ENST00000426370 994 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 BMS1P19-201ENST00000433925 393 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 CKS1BP5-201ENST00000434172 273 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AC127537.2-201ENST00000439258 465 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.65□□□□□ -1.83
CX3CL1P78423 RPL23AP33-201ENST00000442301 452 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 RPL36AP15-201ENST00000444514 266 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AL590399.6-201ENST00000446396 307 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.65□□□□□ -1.83
CX3CL1P78423 TPT1P13-201ENST00000449760 499 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 USP9YP34-201ENST00000453983 808 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC010326.1-201ENST00000462726 602 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CL1P78423 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.65□□□□□ -1.83
CX3CL1P78423 PPBPP1-201ENST00000510807 373 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC007016.1-201ENST00000512110 244 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AC090888.1-201ENST00000561335 1141 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AC090616.2-202ENST00000584248 222 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AC008759.1-201ENST00000589783 983 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AC020914.6-201ENST00000594327 272 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 RPL7P50-201ENST00000600588 727 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC083899.3-201ENST00000603413 594 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AL596327.1-201ENST00000603629 213 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AP000811.1-201ENST00000603803 651 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC010680.3-201ENST00000604215 520 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC008966.2-201ENST00000606157 453 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AL161616.1-201ENST00000611867 286 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC025588.4-201ENST00000615802 908 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AL603755.1-201ENST00000619504 163 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC006065.5-201ENST00000623427 349 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC079248.2-201ENST00000623779 326 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC079228.1-201ENST00000624774 1049 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 AC007671.2-201ENST00000637344 619 ntBASIC3.65□□□□□ -1.83
CX3CL1P78423 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms