Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 HMGB3P6-201ENST00000444896 598 ntBASIC3.64□□□□□ -1.83
TPM4P67936 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.64□□□□□ -1.83
TPM4P67936 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.64□□□□□ -1.83
TPM4P67936 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.64□□□□□ -1.83
TPM4P67936 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.64□□□□□ -1.83
TPM4P67936 AC025857.1-201ENST00000525252 377 ntBASIC3.64□□□□□ -1.83
TPM4P67936 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.64□□□□□ -1.83
TPM4P67936 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.64□□□□□ -1.83
TPM4P67936 OR6C73P-201ENST00000546432 358 ntBASIC3.64□□□□□ -1.83
TPM4P67936 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.64□□□□□ -1.83
TPM4P67936 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.64□□□□□ -1.83
TPM4P67936 AC022916.3-201ENST00000592961 742 ntBASIC3.64□□□□□ -1.83
TPM4P67936 AL451086.1-201ENST00000605596 223 ntBASIC3.64□□□□□ -1.83
TPM4P67936 AC005156.1-201ENST00000613371 573 ntBASIC3.64□□□□□ -1.83
TPM4P67936 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.64□□□□□ -1.83
TPM4P67936 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.64□□□□□ -1.83
TPM4P67936 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TPM4P67936 MTND5P19-201ENST00000424872 1794 ntBASIC3.63□□□□□ -1.83
TPM4P67936 AL365440.1-201ENST00000436135 2167 ntBASIC3.63□□□□□ -1.83
TPM4P67936 SNORA46-201ENST00000384762 135 ntBASIC3.63□□□□□ -1.83
TPM4P67936 HNRNPDP2-201ENST00000406475 478 ntBASIC3.63□□□□□ -1.83
TPM4P67936 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM4P67936 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.63□□□□□ -1.83
TPM4P67936 AC241520.1-201ENST00000422654 1099 ntBASIC3.63□□□□□ -1.83
TPM4P67936 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.63□□□□□ -1.83
TPM4P67936 OR2AS1P-201ENST00000427827 319 ntBASIC3.63□□□□□ -1.83
TPM4P67936 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.63□□□□□ -1.83
TPM4P67936 AL662791.1-201ENST00000441992 928 ntBASIC3.63□□□□□ -1.83
TPM4P67936 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM4P67936 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM4P67936 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM4P67936 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TPM4P67936 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM4P67936 NPM1P41-201ENST00000512920 831 ntBASIC3.63□□□□□ -1.83
TPM4P67936 AC093755.1-201ENST00000512950 1023 ntBASIC3.63□□□□□ -1.83
TPM4P67936 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM4P67936 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.63□□□□□ -1.83
TPM4P67936 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.63□□□□□ -1.83
TPM4P67936 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM4P67936 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.63□□□□□ -1.83
TPM4P67936 AC005972.3-201ENST00000606304 481 ntBASIC3.63□□□□□ -1.83
TPM4P67936 AL157817.1-201ENST00000614264 790 ntBASIC3.63□□□□□ -1.83
TPM4P67936 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.63□□□□□ -1.83
TPM4P67936 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.63□□□□□ -1.83
TPM4P67936 AC127502.3-201ENST00000636170 1206 ntBASIC3.63□□□□□ -1.83
TPM4P67936 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
TPM4P67936 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
TPM4P67936 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TPM4P67936 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TPM4P67936 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TPM4P67936 AC093831.2-201ENST00000624393 3427 ntBASIC3.62□□□□□ -1.83
TPM4P67936 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TPM4P67936 MTND5P24-201ENST00000438892 1767 ntBASIC3.62□□□□□ -1.83
TPM4P67936 HSPA8P19-201ENST00000505359 1517 ntBASIC3.62□□□□□ -1.83
TPM4P67936 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TPM4P67936 AL359837.1-201ENST00000381357 287 ntBASIC3.62□□□□□ -1.83
TPM4P67936 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TPM4P67936 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.62□□□□□ -1.83
TPM4P67936 RPL31P2-201ENST00000413849 377 ntBASIC3.62□□□□□ -1.83
TPM4P67936 CRYBB2P1-203ENST00000415709 538 ntBASIC3.62□□□□□ -1.83
TPM4P67936 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM4P67936 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM4P67936 TRIAP1P1-201ENST00000427062 225 ntBASIC3.62□□□□□ -1.83
TPM4P67936 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TPM4P67936 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.62□□□□□ -1.83
TPM4P67936 AC007688.1-201ENST00000475592 759 ntBASIC3.62□□□□□ -1.83
TPM4P67936 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM4P67936 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TPM4P67936 TMEM248P1-201ENST00000510579 951 ntBASIC3.62□□□□□ -1.83
TPM4P67936 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM4P67936 RN7SKP21-201ENST00000516503 220 ntBASIC3.62□□□□□ -1.83
TPM4P67936 AC010198.2-201ENST00000550612 259 ntBASIC3.62□□□□□ -1.83
TPM4P67936 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.62□□□□□ -1.83
TPM4P67936 AC010735.1-201ENST00000567305 1026 ntBASIC3.62□□□□□ -1.83
TPM4P67936 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.62□□□□□ -1.83
TPM4P67936 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM4P67936 AL590392.1-201ENST00000604960 446 ntBASIC3.62□□□□□ -1.83
TPM4P67936 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.62□□□□□ -1.83
TPM4P67936 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TPM4P67936 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TPM4P67936 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TPM4P67936 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TPM4P67936 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TPM4P67936 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
TPM4P67936 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.61□□□□□ -1.83
TPM4P67936 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TPM4P67936 MIR591-201ENST00000385290 95 ntBASIC3.61□□□□□ -1.83
TPM4P67936 AL590290.1-201ENST00000405336 380 ntBASIC3.61□□□□□ -1.83
TPM4P67936 AC093151.1-201ENST00000427711 313 ntBASIC3.61□□□□□ -1.83
TPM4P67936 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TPM4P67936 NEK4P1-201ENST00000433383 879 ntBASIC3.61□□□□□ -1.83
TPM4P67936 RPL23AP33-201ENST00000442301 452 ntBASIC3.61□□□□□ -1.83
TPM4P67936 GAPDHP27-201ENST00000447427 1020 ntBASIC3.61□□□□□ -1.83
TPM4P67936 RN7SL75P-201ENST00000461926 281 ntBASIC3.61□□□□□ -1.83
TPM4P67936 RPL21P18-201ENST00000469899 480 ntBASIC3.61□□□□□ -1.83
TPM4P67936 KATNBL1P4-201ENST00000503545 918 ntBASIC3.61□□□□□ -1.83
TPM4P67936 AC118282.1-201ENST00000506408 765 ntBASIC3.61□□□□□ -1.83
TPM4P67936 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.61□□□□□ -1.83
TPM4P67936 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TPM4P67936 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms