Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 HMGB3P11-201ENST00000440127 604 ntBASIC4.25□□□□□ -1.73
RIPK4P57078 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.25□□□□□ -1.73
RIPK4P57078 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.25□□□□□ -1.73
RIPK4P57078 AC010401.1-201ENST00000463867 348 ntBASIC4.25□□□□□ -1.73
RIPK4P57078 RN7SL442P-201ENST00000473804 320 ntBASIC4.25□□□□□ -1.73
RIPK4P57078 RPL23AP44-201ENST00000482216 473 ntBASIC4.25□□□□□ -1.73
RIPK4P57078 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.25□□□□□ -1.73
RIPK4P57078 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.25□□□□□ -1.73
RIPK4P57078 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.25□□□□□ -1.73
RIPK4P57078 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.25□□□□□ -1.73
RIPK4P57078 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.25□□□□□ -1.73
RIPK4P57078 AL389895.1-201ENST00000554127 252 ntBASIC4.25□□□□□ -1.73
RIPK4P57078 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.25□□□□□ -1.73
RIPK4P57078 AL157817.1-201ENST00000614264 790 ntBASIC4.25□□□□□ -1.73
RIPK4P57078 AL713922.2-201ENST00000619384 716 ntBASIC4.25□□□□□ -1.73
RIPK4P57078 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.25□□□□□ -1.73
RIPK4P57078 AP006248.2-201ENST00000623309 592 ntBASIC4.25□□□□□ -1.73
RIPK4P57078 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.25□□□□□ -1.73
RIPK4P57078 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.25□□□□□ -1.73
RIPK4P57078 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.25□□□□□ -1.73
RIPK4P57078 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RIPK4P57078 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
RIPK4P57078 AC010329.2-201ENST00000595195 2737 ntBASIC4.24□□□□□ -1.73
RIPK4P57078 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RIPK4P57078 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RIPK4P57078 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RIPK4P57078 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.24□□□□□ -1.73
RIPK4P57078 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.24□□□□□ -1.73
RIPK4P57078 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RIPK4P57078 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RIPK4P57078 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RIPK4P57078 SNORA11.1-201ENST00000408133 129 ntBASIC4.24□□□□□ -1.73
RIPK4P57078 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RIPK4P57078 MRPS33P4-201ENST00000434892 317 ntBASIC4.24□□□□□ -1.73
RIPK4P57078 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.24□□□□□ -1.73
RIPK4P57078 RPL12P46-201ENST00000436610 195 ntBASIC4.24□□□□□ -1.73
RIPK4P57078 CST9LP2-201ENST00000437612 320 ntBASIC4.24□□□□□ -1.73
RIPK4P57078 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.24□□□□□ -1.73
RIPK4P57078 HAUS1P1-201ENST00000505275 832 ntBASIC4.24□□□□□ -1.73
RIPK4P57078 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.24□□□□□ -1.73
RIPK4P57078 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.24□□□□□ -1.73
RIPK4P57078 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.24□□□□□ -1.73
RIPK4P57078 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.24□□□□□ -1.73
RIPK4P57078 AC067805.1-201ENST00000559344 470 ntBASIC4.24□□□□□ -1.73
RIPK4P57078 AC084373.1-201ENST00000603311 235 ntBASIC4.24□□□□□ -1.73
RIPK4P57078 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.24□□□□□ -1.73
RIPK4P57078 AC018816.2-201ENST00000621460 353 ntBASIC4.24□□□□□ -1.73
RIPK4P57078 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.24□□□□□ -1.73
RIPK4P57078 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.24□□□□□ -1.73
RIPK4P57078 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RIPK4P57078 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
RIPK4P57078 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RIPK4P57078 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.23□□□□□ -1.73
RIPK4P57078 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RIPK4P57078 SNORA38.1-201ENST00000364172 131 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 SNORA9-201ENST00000384215 133 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.23□□□□□ -1.73
RIPK4P57078 GTF2IP23-201ENST00000423746 351 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 UBE2V1P1-201ENST00000430836 445 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 AL353705.1-201ENST00000433468 480 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 BX679664.1-201ENST00000434429 253 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.23□□□□□ -1.73
RIPK4P57078 AC006028.1-201ENST00000438379 402 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.23□□□□□ -1.73
RIPK4P57078 RN7SKP57-201ENST00000517248 293 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.23□□□□□ -1.73
RIPK4P57078 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.23□□□□□ -1.73
RIPK4P57078 NPM1P35-201ENST00000533043 868 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 AC006518.1-201ENST00000541449 943 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.23□□□□□ -1.73
RIPK4P57078 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.23□□□□□ -1.73
RIPK4P57078 AC008507.1-201ENST00000587506 734 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 MIMT1-201ENST00000597105 1050 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 AC011492.1-201ENST00000600023 315 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 AC006254.3-201ENST00000603353 884 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.23□□□□□ -1.73
RIPK4P57078 AC135803.1-201ENST00000608748 565 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 AC100793.4-201ENST00000613683 429 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 AC026422.1-201ENST00000623961 452 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 AC104820.1-201ENST00000624183 307 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.23□□□□□ -1.73
RIPK4P57078 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.23□□□□□ -1.73
RIPK4P57078 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RIPK4P57078 USP8P1-201ENST00000494673 3183 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RIPK4P57078 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RIPK4P57078 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.23□□□□□ -1.73
RIPK4P57078 AL049555.1-201ENST00000562834 1933 ntBASIC4.23□□□□□ -1.73
RIPK4P57078 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RIPK4P57078 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RIPK4P57078 ZNF542P-204ENST00000482727 1305 ntBASIC4.22□□□□□ -1.73
RIPK4P57078 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RIPK4P57078 RNU4-47P-201ENST00000410876 114 ntBASIC4.22□□□□□ -1.73
RIPK4P57078 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RIPK4P57078 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.22□□□□□ -1.73
RIPK4P57078 AC022022.1-201ENST00000430304 178 ntBASIC4.22□□□□□ -1.73
RIPK4P57078 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.22□□□□□ -1.73
RIPK4P57078 USP9YP7-201ENST00000436723 430 ntBASIC4.22□□□□□ -1.73
RIPK4P57078 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.22□□□□□ -1.73
RIPK4P57078 USP9YP32-201ENST00000452432 430 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms