Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4□□□□□ -1.77
CLDN20P56880 AL365203.2-201ENST00000423444 196 ntBASIC4□□□□□ -1.77
CLDN20P56880 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4□□□□□ -1.77
CLDN20P56880 RPL30P3-201ENST00000424262 333 ntBASIC4□□□□□ -1.77
CLDN20P56880 SDCBPP2-201ENST00000424643 885 ntBASIC4□□□□□ -1.77
CLDN20P56880 UBE2D3P1-201ENST00000436669 444 ntBASIC4□□□□□ -1.77
CLDN20P56880 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4□□□□□ -1.77
CLDN20P56880 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4□□□□□ -1.77
CLDN20P56880 MTCYBP3-201ENST00000445588 1137 ntBASIC4□□□□□ -1.77
CLDN20P56880 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4□□□□□ -1.77
CLDN20P56880 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4□□□□□ -1.77
CLDN20P56880 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4□□□□□ -1.77
CLDN20P56880 snoU13.7-201ENST00000459220 104 ntBASIC4□□□□□ -1.77
CLDN20P56880 AC011276.1-201ENST00000469688 323 ntBASIC4□□□□□ -1.77
CLDN20P56880 BET1P1-201ENST00000482276 359 ntBASIC4□□□□□ -1.77
CLDN20P56880 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4□□□□□ -1.77
CLDN20P56880 MTND1P22-201ENST00000510572 951 ntBASIC4□□□□□ -1.77
CLDN20P56880 MTCO1P47-201ENST00000523889 1271 ntBASIC4□□□□□ -1.77
CLDN20P56880 OR5AK1P-201ENST00000524837 922 ntBASIC4□□□□□ -1.77
CLDN20P56880 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4□□□□□ -1.77
CLDN20P56880 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4□□□□□ -1.77
CLDN20P56880 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLDN20P56880 SULT1C2P1-202ENST00000562418 459 ntBASIC4□□□□□ -1.77
CLDN20P56880 MIR4284-201ENST00000578924 81 ntBASIC4□□□□□ -1.77
CLDN20P56880 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLDN20P56880 AC069304.2-201ENST00000605154 435 ntBASIC4□□□□□ -1.77
CLDN20P56880 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4□□□□□ -1.77
CLDN20P56880 MIR6891-201ENST00000618788 93 ntBASIC4□□□□□ -1.77
CLDN20P56880 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4□□□□□ -1.77
CLDN20P56880 OR8B1P-202ENST00000641132 1178 ntBASIC4□□□□□ -1.77
CLDN20P56880 MTND5P28-201ENST00000438005 1594 ntBASIC4□□□□□ -1.77
CLDN20P56880 AC012321.1-201ENST00000561622 1588 ntBASIC4□□□□□ -1.77
CLDN20P56880 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4□□□□□ -1.77
CLDN20P56880 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CLDN20P56880 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4□□□□□ -1.77
CLDN20P56880 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN20P56880 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN20P56880 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN20P56880 AP000526.1-201ENST00000603308 1388 ntBASIC4□□□□□ -1.77
CLDN20P56880 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4□□□□□ -1.77
CLDN20P56880 AC117529.2-201ENST00000512159 2068 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CLDN20P56880 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN20P56880 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN20P56880 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN20P56880 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN20P56880 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN20P56880 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN20P56880 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CLDN20P56880 RNU1-44P-201ENST00000384453 163 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 MIR649-201ENST00000384843 97 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 MIR708-201ENST00000390708 88 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN20P56880 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN20P56880 RNU2-21P-201ENST00000410368 188 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 TPT1P2-201ENST00000413105 503 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.99□□□□□ -1.77
CLDN20P56880 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN20P56880 AL139095.3-201ENST00000419672 1203 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AL593851.1-201ENST00000426171 157 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC234781.2-201ENST00000426370 994 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN20P56880 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN20P56880 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.99□□□□□ -1.77
CLDN20P56880 TXNL1P1-201ENST00000429528 554 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 VDAC1P6-201ENST00000430062 855 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC011998.1-201ENST00000433403 117 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 RPS25P9-201ENST00000435591 252 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 CBX1P1-201ENST00000440184 427 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 MTND2P20-201ENST00000440805 661 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 MTCO1P48-201ENST00000448024 1096 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN20P56880 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN20P56880 SLC31A1P1-201ENST00000451221 567 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN20P56880 AC079804.1-201ENST00000461922 436 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC087879.1-201ENST00000474343 374 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 CEACAMP10-202ENST00000495431 496 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 SNX5P1-201ENST00000505757 1041 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 MTATP6P22-201ENST00000507369 598 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 HMGB1P28-201ENST00000507778 552 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.99□□□□□ -1.77
CLDN20P56880 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN20P56880 RNA5SP497-201ENST00000516081 97 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 Y_RNA.688-201ENST00000516565 95 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN20P56880 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN20P56880 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN20P56880 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN20P56880 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN20P56880 AC091515.1-201ENST00000548110 679 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC125611.1-201ENST00000549563 229 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC068446.3-201ENST00000555285 382 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN20P56880 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN20P56880 MTCYBP28-201ENST00000566728 1132 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN20P56880 SNORD39.3-201ENST00000584451 71 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC107982.3-201ENST00000584957 985 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms