Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH11P55287 RPL7P22-201ENST00000466005 733 ntBASIC3.88□□□□□ -1.79
CDH11P55287 RPL35AP15-201ENST00000468042 339 ntBASIC3.88□□□□□ -1.79
CDH11P55287 RN7SL303P-201ENST00000469773 251 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AC006517.1-201ENST00000480485 328 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH11P55287 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH11P55287 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH11P55287 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH11P55287 AC005351.1-201ENST00000511152 786 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH11P55287 AC116353.3-201ENST00000511215 249 ntBASIC3.88□□□□□ -1.79
CDH11P55287 RNU6-1129P-201ENST00000515964 104 ntBASIC3.88□□□□□ -1.79
CDH11P55287 SOD1P3-201ENST00000518682 454 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH11P55287 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH11P55287 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH11P55287 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH11P55287 AP000827.1-201ENST00000527814 258 ntBASIC3.88□□□□□ -1.79
CDH11P55287 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH11P55287 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH11P55287 SERPINE4P-201ENST00000554978 281 ntBASIC3.88□□□□□ -1.79
CDH11P55287 TRAV15-201ENST00000556680 249 ntBASIC3.88□□□□□ -1.79
CDH11P55287 EIF5A2P1-201ENST00000564027 460 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH11P55287 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH11P55287 AL590392.1-201ENST00000604960 446 ntBASIC3.88□□□□□ -1.79
CDH11P55287 ARF4P1-201ENST00000605447 541 ntBASIC3.88□□□□□ -1.79
CDH11P55287 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH11P55287 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH11P55287 AL354760.1-201ENST00000608357 643 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AC092653.1-201ENST00000608509 531 ntBASIC3.88□□□□□ -1.79
CDH11P55287 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH11P55287 AC005962.2-201ENST00000611427 652 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH11P55287 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CDH11P55287 AC004825.2-201ENST00000616634 455 ntBASIC3.88□□□□□ -1.79
CDH11P55287 MKKS-204ENST00000639674 192 ntBASIC3.88□□□□□ -1.79
CDH11P55287 OR52H1-202ENST00000641796 1061 ntBASIC3.88□□□□□ -1.79
CDH11P55287 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH11P55287 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH11P55287 AC007390.2-201ENST00000606229 3803 ntBASIC3.88□□□□□ -1.79
CDH11P55287 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH11P55287 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH11P55287 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CDH11P55287 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH11P55287 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH11P55287 AC107081.3-201ENST00000612715 2034 ntBASIC3.87□□□□□ -1.79
CDH11P55287 XPOTP1-201ENST00000443317 2398 ntBASIC3.87□□□□□ -1.79
CDH11P55287 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH11P55287 RNA5SP391-201ENST00000363456 119 ntBASIC3.87□□□□□ -1.79
CDH11P55287 RNU6-115P-201ENST00000364310 107 ntBASIC3.87□□□□□ -1.79
CDH11P55287 RN7SKP227-201ENST00000364445 330 ntBASIC3.87□□□□□ -1.79
CDH11P55287 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CDH11P55287 RNU6-146P-201ENST00000384602 108 ntBASIC3.87□□□□□ -1.79
CDH11P55287 OR6C69P-201ENST00000394268 893 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AC097374.1-203ENST00000400783 485 ntBASIC3.87□□□□□ -1.79
CDH11P55287 TMSB4XP8-201ENST00000402089 135 ntBASIC3.87□□□□□ -1.79
CDH11P55287 RNU2-21P-201ENST00000410368 188 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH11P55287 AC011933.1-201ENST00000413334 321 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AL136133.1-201ENST00000413694 376 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AC004022.2-201ENST00000413824 193 ntBASIC3.87□□□□□ -1.79
CDH11P55287 TMSB4XP6-201ENST00000415187 135 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AC092634.6-201ENST00000418558 192 ntBASIC3.87□□□□□ -1.79
CDH11P55287 RPL7P53-201ENST00000421245 739 ntBASIC3.87□□□□□ -1.79
CDH11P55287 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH11P55287 TMSB4XP1-201ENST00000424567 135 ntBASIC3.87□□□□□ -1.79
CDH11P55287 RSL24D1P6-201ENST00000426934 401 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH11P55287 AL513175.1-201ENST00000431492 780 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH11P55287 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CDH11P55287 AL132765.1-201ENST00000434165 553 ntBASIC3.87□□□□□ -1.79
CDH11P55287 RPS20P1-201ENST00000434853 354 ntBASIC3.87□□□□□ -1.79
CDH11P55287 RPS3AP54-201ENST00000435535 734 ntBASIC3.87□□□□□ -1.79
CDH11P55287 RPL7P28-201ENST00000437739 740 ntBASIC3.87□□□□□ -1.79
CDH11P55287 GSTA7P-201ENST00000438425 448 ntBASIC3.87□□□□□ -1.79
CDH11P55287 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH11P55287 MTATP6P26-201ENST00000445926 662 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AL034418.1-201ENST00000448675 860 ntBASIC3.87□□□□□ -1.79
CDH11P55287 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH11P55287 AL133477.1-201ENST00000457472 514 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AC116533.1-201ENST00000459748 321 ntBASIC3.87□□□□□ -1.79
CDH11P55287 RN7SL98P-201ENST00000462271 300 ntBASIC3.87□□□□□ -1.79
CDH11P55287 PPIAP21-201ENST00000464473 501 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH11P55287 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH11P55287 WBP1LP4-201ENST00000505043 344 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH11P55287 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH11P55287 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH11P55287 AC021146.8-201ENST00000507455 733 ntBASIC3.87□□□□□ -1.79
CDH11P55287 SNORA3.4-201ENST00000515969 96 ntBASIC3.87□□□□□ -1.79
CDH11P55287 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH11P55287 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.87□□□□□ -1.79
CDH11P55287 SMARCE1P4-201ENST00000523647 241 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH11P55287 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH11P55287 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 212.9 ms