Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COPAP53621 AL592148.3-201ENST00000608771 2646 ntBASIC4.78□□□□□ -1.64
COPAP53621 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COPAP53621 MAPK10-303ENST00000641324 3959 ntBASIC4.78□□□□□ -1.64
COPAP53621 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COPAP53621 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COPAP53621 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.78□□□□□ -1.64
COPAP53621 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COPAP53621 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COPAP53621 Y_RNA.201-201ENST00000364052 96 ntBASIC4.78□□□□□ -1.64
COPAP53621 MIR649-201ENST00000384843 97 ntBASIC4.78□□□□□ -1.64
COPAP53621 ZNF603P-201ENST00000405613 487 ntBASIC4.78□□□□□ -1.64
COPAP53621 RNA5SP239-201ENST00000410218 129 ntBASIC4.78□□□□□ -1.64
COPAP53621 RPS15AP38-201ENST00000413110 372 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.78□□□□□ -1.64
COPAP53621 RPEP3-201ENST00000425462 676 ntBASIC4.78□□□□□ -1.64
COPAP53621 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.78□□□□□ -1.64
COPAP53621 AC096632.1-201ENST00000427395 310 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.78□□□□□ -1.64
COPAP53621 AL590103.1-201ENST00000434488 307 ntBASIC4.78□□□□□ -1.64
COPAP53621 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.78□□□□□ -1.64
COPAP53621 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.78□□□□□ -1.64
COPAP53621 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.78□□□□□ -1.64
COPAP53621 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.78□□□□□ -1.64
COPAP53621 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.78□□□□□ -1.64
COPAP53621 MTCO3P16-201ENST00000454456 754 ntBASIC4.78□□□□□ -1.64
COPAP53621 RPL18AP17-201ENST00000455326 198 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC005008.1-201ENST00000456151 612 ntBASIC4.78□□□□□ -1.64
COPAP53621 snoU13.7-201ENST00000459220 104 ntBASIC4.78□□□□□ -1.64
COPAP53621 RPS23P7-201ENST00000466210 444 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC087879.1-201ENST00000474343 374 ntBASIC4.78□□□□□ -1.64
COPAP53621 AP000893.1-201ENST00000474462 794 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.78□□□□□ -1.64
COPAP53621 RPS4XP18-201ENST00000495480 763 ntBASIC4.78□□□□□ -1.64
COPAP53621 OR2A20P-203ENST00000498397 1268 ntBASIC4.78□□□□□ -1.64
COPAP53621 MTCYBP17-201ENST00000503579 789 ntBASIC4.78□□□□□ -1.64
COPAP53621 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.78□□□□□ -1.64
COPAP53621 MTATP6P22-201ENST00000507369 598 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC005178.1-201ENST00000508392 440 ntBASIC4.78□□□□□ -1.64
COPAP53621 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.78□□□□□ -1.64
COPAP53621 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.78□□□□□ -1.64
COPAP53621 MTND5P13-201ENST00000513046 1079 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.78□□□□□ -1.64
COPAP53621 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.78□□□□□ -1.64
COPAP53621 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.78□□□□□ -1.64
COPAP53621 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
COPAP53621 CYCSP28-201ENST00000534284 321 ntBASIC4.78□□□□□ -1.64
COPAP53621 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.78□□□□□ -1.64
COPAP53621 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.78□□□□□ -1.64
COPAP53621 AC007954.1-201ENST00000554198 494 ntBASIC4.78□□□□□ -1.64
COPAP53621 RPL21P7-201ENST00000557463 483 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC087477.6-201ENST00000559595 843 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.78□□□□□ -1.64
COPAP53621 SULT1C2P1-202ENST00000562418 459 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC012435.1-202ENST00000568772 240 ntBASIC4.78□□□□□ -1.64
COPAP53621 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.78□□□□□ -1.64
COPAP53621 RN7SL652P-201ENST00000577769 300 ntBASIC4.78□□□□□ -1.64
COPAP53621 MIR3915-201ENST00000578518 97 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.78□□□□□ -1.64
COPAP53621 RPL12P25-202ENST00000598100 674 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.78□□□□□ -1.64
COPAP53621 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC008083.4-201ENST00000615076 444 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC099669.2-201ENST00000616549 437 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.78□□□□□ -1.64
COPAP53621 AC140113.4-201ENST00000622087 222 ntBASIC4.78□□□□□ -1.64
COPAP53621 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.78□□□□□ -1.64
COPAP53621 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.78□□□□□ -1.64
COPAP53621 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COPAP53621 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COPAP53621 EIF2AP4-201ENST00000424793 1781 ntBASIC4.78□□□□□ -1.64
COPAP53621 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.78□□□□□ -1.64
COPAP53621 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.78□□□□□ -1.64
COPAP53621 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COPAP53621 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.77□□□□□ -1.65
COPAP53621 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
COPAP53621 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COPAP53621 Y_RNA.18-201ENST00000362461 102 ntBASIC4.77□□□□□ -1.65
COPAP53621 RPL23AP29-201ENST00000397284 453 ntBASIC4.77□□□□□ -1.65
COPAP53621 SNRPEP2-201ENST00000397592 279 ntBASIC4.77□□□□□ -1.65
COPAP53621 AL031577.2-201ENST00000404133 280 ntBASIC4.77□□□□□ -1.65
COPAP53621 AL591848.1-201ENST00000413092 322 ntBASIC4.77□□□□□ -1.65
COPAP53621 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.77□□□□□ -1.65
COPAP53621 AC009237.10-201ENST00000414112 510 ntBASIC4.77□□□□□ -1.65
COPAP53621 AC004690.1-201ENST00000418216 328 ntBASIC4.77□□□□□ -1.65
COPAP53621 AC140479.3-201ENST00000418944 1126 ntBASIC4.77□□□□□ -1.65
COPAP53621 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.77□□□□□ -1.65
COPAP53621 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.77□□□□□ -1.65
COPAP53621 RPS6P12-201ENST00000432491 726 ntBASIC4.77□□□□□ -1.65
COPAP53621 MTCO3P5-201ENST00000433620 714 ntBASIC4.77□□□□□ -1.65
COPAP53621 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.77□□□□□ -1.65
COPAP53621 AL451139.1-201ENST00000434718 346 ntBASIC4.77□□□□□ -1.65
COPAP53621 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.77□□□□□ -1.65
COPAP53621 AC092427.1-201ENST00000439177 601 ntBASIC4.77□□□□□ -1.65
COPAP53621 AC079168.2-201ENST00000453977 416 ntBASIC4.77□□□□□ -1.65
COPAP53621 MTCO3P2-201ENST00000457365 171 ntBASIC4.77□□□□□ -1.65
COPAP53621 RAP1BP2-201ENST00000478270 544 ntBASIC4.77□□□□□ -1.65
COPAP53621 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.77□□□□□ -1.65
COPAP53621 SNX5P1-201ENST00000505757 1041 ntBASIC4.77□□□□□ -1.65
COPAP53621 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms