Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.14□□□□□ -1.91
GTF2A1P52655 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
GTF2A1P52655 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
GTF2A1P52655 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
GTF2A1P52655 SNORD56.5-201ENST00000364281 72 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
GTF2A1P52655 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
GTF2A1P52655 RNU6-356P-201ENST00000384140 107 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 RPS3AP26-201ENST00000398259 784 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 RN7SKP222-201ENST00000410651 315 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 AC245054.1-201ENST00000420944 258 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.14□□□□□ -1.91
GTF2A1P52655 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.14□□□□□ -1.91
GTF2A1P52655 NIPA2P1-201ENST00000426223 976 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 OR4F13P-201ENST00000428478 931 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.14□□□□□ -1.91
GTF2A1P52655 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
GTF2A1P52655 AC006326.1-201ENST00000445465 787 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.14□□□□□ -1.91
GTF2A1P52655 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.14□□□□□ -1.91
GTF2A1P52655 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.14□□□□□ -1.91
GTF2A1P52655 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.14□□□□□ -1.91
GTF2A1P52655 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.14□□□□□ -1.91
GTF2A1P52655 RPL7P19-201ENST00000469948 618 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 AC006511.1-201ENST00000470614 315 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 AC090071.1-201ENST00000507713 644 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 FCF1P8-201ENST00000510322 597 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.14□□□□□ -1.91
GTF2A1P52655 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.14□□□□□ -1.91
GTF2A1P52655 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.14□□□□□ -1.91
GTF2A1P52655 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.14□□□□□ -1.91
GTF2A1P52655 AC234775.3-201ENST00000564612 656 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.14□□□□□ -1.91
GTF2A1P52655 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.14□□□□□ -1.91
GTF2A1P52655 RPL12P50-201ENST00000603116 116 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.14□□□□□ -1.91
GTF2A1P52655 AC002076.2-201ENST00000617362 122 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 AC010297.1-201ENST00000623948 149 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 AC091903.1-201ENST00000624322 454 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
GTF2A1P52655 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
GTF2A1P52655 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.14□□□□□ -1.91
GTF2A1P52655 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
GTF2A1P52655 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.14□□□□□ -1.91
GTF2A1P52655 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
GTF2A1P52655 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
GTF2A1P52655 MIR372-201ENST00000362225 67 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.13□□□□□ -1.91
GTF2A1P52655 MT-TP-201ENST00000387461 68 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 SEPT7P2-202ENST00000398921 823 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 RNA5SP317-201ENST00000410176 116 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 RNA5SP311-201ENST00000411290 116 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 BX682237.1-201ENST00000415016 335 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.13□□□□□ -1.91
GTF2A1P52655 OR8F1P-201ENST00000425243 930 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 AL591419.1-201ENST00000427423 339 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.13□□□□□ -1.91
GTF2A1P52655 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.13□□□□□ -1.91
GTF2A1P52655 AC127537.2-201ENST00000439258 465 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 RPL23AP58-201ENST00000440453 469 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 CEACAMP9-201ENST00000442990 513 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.13□□□□□ -1.91
GTF2A1P52655 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.13□□□□□ -1.91
GTF2A1P52655 AC090525.1-201ENST00000479116 478 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.13□□□□□ -1.91
GTF2A1P52655 PTGES3P3-201ENST00000511479 482 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 RNA5SP315-201ENST00000516340 116 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 RNA5SP312-201ENST00000517068 116 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.13□□□□□ -1.91
GTF2A1P52655 MIR4446-201ENST00000578505 67 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 AL356575.1-201ENST00000603008 283 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 SNHG22-203ENST00000617833 660 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 MTND5P3-201ENST00000438536 1800 ntBASIC3.13□□□□□ -1.91
GTF2A1P52655 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
GTF2A1P52655 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GTF2A1P52655 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.13□□□□□ -1.91
GTF2A1P52655 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GTF2A1P52655 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2A1P52655 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2A1P52655 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2A1P52655 MIR30B-201ENST00000384850 88 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 RPL31P1-201ENST00000398116 372 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.12□□□□□ -1.91
GTF2A1P52655 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2A1P52655 YY1P1-201ENST00000427625 668 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 AP002371.1-201ENST00000463604 433 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.12□□□□□ -1.91
GTF2A1P52655 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2A1P52655 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2A1P52655 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.12□□□□□ -1.91
GTF2A1P52655 AC108064.1-201ENST00000513791 460 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2A1P52655 HMGB1P41-201ENST00000520234 440 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 OR5G4P-201ENST00000525251 760 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.12□□□□□ -1.91
GTF2A1P52655 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GTF2A1P52655 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.12□□□□□ -1.91
GTF2A1P52655 AC006504.3-201ENST00000586818 523 ntBASIC3.12□□□□□ -1.91
GTF2A1P52655 BDH2P1-201ENST00000602288 736 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms