Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.82□□□□□ -1.64
NEK3P51956 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.82□□□□□ -1.64
NEK3P51956 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.82□□□□□ -1.64
NEK3P51956 MIR5699-201ENST00000578903 90 ntBASIC4.82□□□□□ -1.64
NEK3P51956 AC090616.2-202ENST00000584248 222 ntBASIC4.82□□□□□ -1.64
NEK3P51956 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.82□□□□□ -1.64
NEK3P51956 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.82□□□□□ -1.64
NEK3P51956 AC233280.2-201ENST00000603917 1070 ntBASIC4.82□□□□□ -1.64
NEK3P51956 AC006329.2-201ENST00000611491 394 ntBASIC4.82□□□□□ -1.64
NEK3P51956 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.82□□□□□ -1.64
NEK3P51956 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.82□□□□□ -1.64
NEK3P51956 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.82□□□□□ -1.64
NEK3P51956 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.82□□□□□ -1.64
NEK3P51956 AC087359.1-201ENST00000508335 1740 ntBASIC4.82□□□□□ -1.64
NEK3P51956 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEK3P51956 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEK3P51956 OR51H2P-202ENST00000641424 3046 ntBASIC4.82□□□□□ -1.64
NEK3P51956 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.82□□□□□ -1.64
NEK3P51956 MAPK10-320ENST00000641462 6696 ntBASIC4.82□□□□□ -1.64
NEK3P51956 AC027287.1-201ENST00000553115 1453 ntBASIC4.81□□□□□ -1.64
NEK3P51956 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NEK3P51956 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
NEK3P51956 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEK3P51956 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEK3P51956 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEK3P51956 AL590240.1-201ENST00000334118 313 ntBASIC4.81□□□□□ -1.64
NEK3P51956 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NEK3P51956 AL031679.1-201ENST00000400616 525 ntBASIC4.81□□□□□ -1.64
NEK3P51956 Y_RNA.625-201ENST00000411256 107 ntBASIC4.81□□□□□ -1.64
NEK3P51956 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.81□□□□□ -1.64
NEK3P51956 AIMP1P1-201ENST00000418670 937 ntBASIC4.81□□□□□ -1.64
NEK3P51956 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.81□□□□□ -1.64
NEK3P51956 RPL7P57-201ENST00000423238 740 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AC019178.2-201ENST00000423595 505 ntBASIC4.81□□□□□ -1.64
NEK3P51956 PSMA6P3-201ENST00000428242 164 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AL451139.1-201ENST00000434718 346 ntBASIC4.81□□□□□ -1.64
NEK3P51956 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NEK3P51956 UBE2FP3-201ENST00000436366 524 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AC011753.3-201ENST00000443436 406 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AC104651.2-201ENST00000447549 528 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.81□□□□□ -1.64
NEK3P51956 AL133217.1-201ENST00000450980 425 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.81□□□□□ -1.64
NEK3P51956 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.81□□□□□ -1.64
NEK3P51956 AC010326.1-201ENST00000462726 602 ntBASIC4.81□□□□□ -1.64
NEK3P51956 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.81□□□□□ -1.64
NEK3P51956 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.81□□□□□ -1.64
NEK3P51956 RPL23AP72-201ENST00000492447 435 ntBASIC4.81□□□□□ -1.64
NEK3P51956 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.81□□□□□ -1.64
NEK3P51956 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.81□□□□□ -1.64
NEK3P51956 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.81□□□□□ -1.64
NEK3P51956 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.81□□□□□ -1.64
NEK3P51956 AC091868.1-201ENST00000508746 304 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.81□□□□□ -1.64
NEK3P51956 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.81□□□□□ -1.64
NEK3P51956 RNU6-150P-201ENST00000516237 95 ntBASIC4.81□□□□□ -1.64
NEK3P51956 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.81□□□□□ -1.64
NEK3P51956 EEF1B2P4-201ENST00000551398 348 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AL110118.1-201ENST00000553543 400 ntBASIC4.81□□□□□ -1.64
NEK3P51956 RPL21P7-201ENST00000557463 483 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.81□□□□□ -1.64
NEK3P51956 AC209154.1-201ENST00000582156 337 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.81□□□□□ -1.64
NEK3P51956 VN1R90P-201ENST00000595717 726 ntBASIC4.81□□□□□ -1.64
NEK3P51956 COX6CP4-201ENST00000605798 228 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.81□□□□□ -1.64
NEK3P51956 AC079248.2-201ENST00000623779 326 ntBASIC4.81□□□□□ -1.64
NEK3P51956 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.81□□□□□ -1.64
NEK3P51956 AL391684.1-202ENST00000641293 1636 ntBASIC4.81□□□□□ -1.64
NEK3P51956 AL442639.1-201ENST00000625030 1899 ntBASIC4.81□□□□□ -1.64
NEK3P51956 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NEK3P51956 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.81□□□□□ -1.64
NEK3P51956 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.81□□□□□ -1.64
NEK3P51956 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.81□□□□□ -1.64
NEK3P51956 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NEK3P51956 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEK3P51956 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.8□□□□□ -1.64
NEK3P51956 AC010928.1-201ENST00000592477 1447 ntBASIC4.8□□□□□ -1.64
NEK3P51956 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.8□□□□□ -1.64
NEK3P51956 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.8□□□□□ -1.64
NEK3P51956 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NEK3P51956 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEK3P51956 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.8□□□□□ -1.64
NEK3P51956 AC011477.1-204ENST00000623416 1325 ntBASIC4.8□□□□□ -1.64
NEK3P51956 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEK3P51956 RNA5SP505-201ENST00000364748 108 ntBASIC4.8□□□□□ -1.64
NEK3P51956 SNORA56-201ENST00000383966 129 ntBASIC4.8□□□□□ -1.64
NEK3P51956 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NEK3P51956 DHFRP6-201ENST00000401776 268 ntBASIC4.8□□□□□ -1.64
NEK3P51956 RNU4-72P-201ENST00000410754 173 ntBASIC4.8□□□□□ -1.64
NEK3P51956 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.8□□□□□ -1.64
NEK3P51956 RPL23AP39-201ENST00000415533 405 ntBASIC4.8□□□□□ -1.64
NEK3P51956 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.8□□□□□ -1.64
NEK3P51956 AC004690.1-201ENST00000418216 328 ntBASIC4.8□□□□□ -1.64
NEK3P51956 PTP4A1P5-201ENST00000420305 455 ntBASIC4.8□□□□□ -1.64
NEK3P51956 AL593851.1-201ENST00000426171 157 ntBASIC4.8□□□□□ -1.64
NEK3P51956 MRPS18BP2-201ENST00000434310 759 ntBASIC4.8□□□□□ -1.64
NEK3P51956 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.8□□□□□ -1.64
NEK3P51956 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms