Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
BRCA2P51587 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
BRCA2P51587 TAB3P1-202ENST00000452645 1634 ntBASIC3.14□□□□□ -1.91
BRCA2P51587 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
BRCA2P51587 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.13□□□□□ -1.91
BRCA2P51587 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC3.13□□□□□ -1.91
BRCA2P51587 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BRCA2P51587 MIR592-201ENST00000384959 97 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 RPL21P6-201ENST00000479171 504 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 ARL4AP1-201ENST00000503220 705 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 RNA5SP148-201ENST00000516527 94 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.13□□□□□ -1.91
BRCA2P51587 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.13□□□□□ -1.91
BRCA2P51587 MRPS21P9-201ENST00000571150 257 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
BRCA2P51587 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRCA2P51587 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRCA2P51587 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BRCA2P51587 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.13□□□□□ -1.91
BRCA2P51587 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BRCA2P51587 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRCA2P51587 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRCA2P51587 NPM1P37-201ENST00000403105 874 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 OR5H5P-201ENST00000503164 928 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.13□□□□□ -1.91
BRCA2P51587 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC3.13□□□□□ -1.91
BRCA2P51587 OR5G4P-201ENST00000525251 760 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.13□□□□□ -1.91
BRCA2P51587 AC079228.1-201ENST00000624774 1049 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
BRCA2P51587 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.13□□□□□ -1.91
BRCA2P51587 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRCA2P51587 Y_RNA.140-201ENST00000363474 103 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 Y_RNA.595-201ENST00000410403 105 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 RN7SKP210-201ENST00000459176 261 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 RNA5SP154-201ENST00000516193 111 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.13□□□□□ -1.91
BRCA2P51587 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
BRCA2P51587 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRCA2P51587 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRCA2P51587 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC3.12□□□□□ -1.91
BRCA2P51587 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.12□□□□□ -1.91
BRCA2P51587 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BRCA2P51587 MRPS31P2-201ENST00000451581 518 ntBASIC3.12□□□□□ -1.91
BRCA2P51587 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.12□□□□□ -1.91
BRCA2P51587 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRCA2P51587 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
BRCA2P51587 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BRCA2P51587 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRCA2P51587 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.12□□□□□ -1.91
BRCA2P51587 MFSD8-233ENST00000641482 4860 ntBASIC3.12□□□□□ -1.91
BRCA2P51587 AP002088.1-201ENST00000382740 395 ntBASIC3.12□□□□□ -1.91
BRCA2P51587 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.12□□□□□ -1.91
BRCA2P51587 B3GNT2P1-201ENST00000434960 952 ntBASIC3.12□□□□□ -1.91
BRCA2P51587 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
BRCA2P51587 MIR4498-201ENST00000577599 66 ntBASIC3.12□□□□□ -1.91
BRCA2P51587 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
BRCA2P51587 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
BRCA2P51587 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRCA2P51587 AC048351.1-201ENST00000420064 602 ntBASIC3.12□□□□□ -1.91
BRCA2P51587 TRIM60P18-201ENST00000441518 828 ntBASIC3.12□□□□□ -1.91
BRCA2P51587 MTND2P25-201ENST00000449028 610 ntBASIC3.12□□□□□ -1.91
BRCA2P51587 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.12□□□□□ -1.91
BRCA2P51587 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.12□□□□□ -1.91
BRCA2P51587 NTAN1P1-201ENST00000603150 646 ntBASIC3.12□□□□□ -1.91
BRCA2P51587 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA2P51587 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA2P51587 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA2P51587 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA2P51587 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA2P51587 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
BRCA2P51587 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA2P51587 RNA5SP213-201ENST00000391031 106 ntBASIC3.11□□□□□ -1.91
BRCA2P51587 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCA2P51587 AP001025.2-201ENST00000490908 477 ntBASIC3.11□□□□□ -1.91
BRCA2P51587 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.11□□□□□ -1.91
BRCA2P51587 CTSLP2-204ENST00000629029 392 ntBASIC3.11□□□□□ -1.91
BRCA2P51587 AC027290.2-201ENST00000623210 18662 ntBASIC3.11□□□□□ -1.91
BRCA2P51587 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA2P51587 AC087190.4-201ENST00000574616 8334 ntBASIC3.11□□□□□ -1.91
BRCA2P51587 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC3.11□□□□□ -1.91
BRCA2P51587 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.11□□□□□ -1.91
BRCA2P51587 AC008725.1-201ENST00000605123 2263 ntBASIC3.11□□□□□ -1.91
BRCA2P51587 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA2P51587 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.11□□□□□ -1.91
BRCA2P51587 MTCYBP14-201ENST00000457471 715 ntBASIC3.11□□□□□ -1.91
BRCA2P51587 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.11□□□□□ -1.91
BRCA2P51587 AP001636.2-201ENST00000525517 696 ntBASIC3.11□□□□□ -1.91
BRCA2P51587 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA2P51587 OR4K7P-201ENST00000580232 945 ntBASIC3.11□□□□□ -1.91
BRCA2P51587 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.11□□□□□ -1.91
BRCA2P51587 SYT14P1-202ENST00000600441 1448 ntBASIC3.11□□□□□ -1.91
BRCA2P51587 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.11□□□□□ -1.91
BRCA2P51587 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCA2P51587 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
BRCA2P51587 SNORD114-30-201ENST00000364448 72 ntBASIC3.1□□□□□ -1.91
BRCA2P51587 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BRCA2P51587 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.1□□□□□ -1.91
BRCA2P51587 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC3.1□□□□□ -1.91
BRCA2P51587 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms