Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.1□□□□□ -1.75
LHX1P48742 MIR5708-201ENST00000579723 85 ntBASIC4.1□□□□□ -1.75
LHX1P48742 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.1□□□□□ -1.75
LHX1P48742 MRPS35P3-201ENST00000603189 709 ntBASIC4.1□□□□□ -1.75
LHX1P48742 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.1□□□□□ -1.75
LHX1P48742 AL160237.3-201ENST00000604114 1013 ntBASIC4.1□□□□□ -1.75
LHX1P48742 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.1□□□□□ -1.75
LHX1P48742 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.1□□□□□ -1.75
LHX1P48742 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.1□□□□□ -1.75
LHX1P48742 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.1□□□□□ -1.75
LHX1P48742 AL356121.2-201ENST00000624715 780 ntBASIC4.1□□□□□ -1.75
LHX1P48742 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LHX1P48742 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LHX1P48742 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LHX1P48742 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
LHX1P48742 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LHX1P48742 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LHX1P48742 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.1□□□□□ -1.75
LHX1P48742 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LHX1P48742 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.09□□□□□ -1.75
LHX1P48742 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.09□□□□□ -1.75
LHX1P48742 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
LHX1P48742 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LHX1P48742 UBE3AP2-201ENST00000429033 2259 ntBASIC4.09□□□□□ -1.75
LHX1P48742 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LHX1P48742 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LHX1P48742 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
LHX1P48742 RNU4-51P-201ENST00000364206 140 ntBASIC4.09□□□□□ -1.75
LHX1P48742 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LHX1P48742 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LHX1P48742 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.09□□□□□ -1.75
LHX1P48742 NUP35P2-201ENST00000416748 943 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.09□□□□□ -1.75
LHX1P48742 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.09□□□□□ -1.75
LHX1P48742 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.09□□□□□ -1.75
LHX1P48742 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LHX1P48742 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.09□□□□□ -1.75
LHX1P48742 AL591419.1-201ENST00000427423 339 ntBASIC4.09□□□□□ -1.75
LHX1P48742 HIGD1AP12-201ENST00000427832 281 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC011742.1-201ENST00000431448 434 ntBASIC4.09□□□□□ -1.75
LHX1P48742 Z74696.2-201ENST00000436514 498 ntBASIC4.09□□□□□ -1.75
LHX1P48742 PPIAP17-201ENST00000438507 471 ntBASIC4.09□□□□□ -1.75
LHX1P48742 HMGB3P6-201ENST00000444896 598 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.09□□□□□ -1.75
LHX1P48742 AL606517.1-201ENST00000446914 387 ntBASIC4.09□□□□□ -1.75
LHX1P48742 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
LHX1P48742 RPS17P13-201ENST00000448974 407 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.09□□□□□ -1.75
LHX1P48742 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.09□□□□□ -1.75
LHX1P48742 HMGB1P21-201ENST00000502313 581 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC108941.1-201ENST00000502853 530 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC011352.3-201ENST00000505162 593 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC026726.1-201ENST00000512859 601 ntBASIC4.09□□□□□ -1.75
LHX1P48742 RNA5SP154-201ENST00000516193 111 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC023632.4-201ENST00000517783 191 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.09□□□□□ -1.75
LHX1P48742 AC008802.1-201ENST00000519121 791 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.09□□□□□ -1.75
LHX1P48742 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LHX1P48742 AC092747.2-201ENST00000545069 983 ntBASIC4.09□□□□□ -1.75
LHX1P48742 EIF5A2P1-201ENST00000564027 460 ntBASIC4.09□□□□□ -1.75
LHX1P48742 MTND1P8-201ENST00000571424 950 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC087499.8-201ENST00000578406 226 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.09□□□□□ -1.75
LHX1P48742 AC022069.1-201ENST00000582910 658 ntBASIC4.09□□□□□ -1.75
LHX1P48742 MTCO2P2-201ENST00000591258 225 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AL391001.1-201ENST00000602747 715 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AL354760.1-201ENST00000608357 643 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC009237.15-201ENST00000610252 501 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AL050303.3-201ENST00000613704 284 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC010975.3-201ENST00000618727 978 ntBASIC4.09□□□□□ -1.75
LHX1P48742 AC000123.2-201ENST00000623124 461 ntBASIC4.09□□□□□ -1.75
LHX1P48742 OR1S1-201ENST00000624470 978 ntBASIC4.09□□□□□ -1.75
LHX1P48742 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.09□□□□□ -1.75
LHX1P48742 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LHX1P48742 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LHX1P48742 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LHX1P48742 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LHX1P48742 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.08□□□□□ -1.76
LHX1P48742 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
LHX1P48742 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LHX1P48742 HMGB1P5-201ENST00000255320 642 ntBASIC4.08□□□□□ -1.76
LHX1P48742 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LHX1P48742 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LHX1P48742 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LHX1P48742 MIR448-201ENST00000362131 111 ntBASIC4.08□□□□□ -1.76
LHX1P48742 RNU6-984P-201ENST00000363236 109 ntBASIC4.08□□□□□ -1.76
LHX1P48742 RHOT1P2-201ENST00000366423 333 ntBASIC4.08□□□□□ -1.76
LHX1P48742 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LHX1P48742 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LHX1P48742 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.08□□□□□ -1.76
LHX1P48742 RNU6-444P-201ENST00000383988 108 ntBASIC4.08□□□□□ -1.76
LHX1P48742 SNORD116-12-201ENST00000384468 92 ntBASIC4.08□□□□□ -1.76
LHX1P48742 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.08□□□□□ -1.76
LHX1P48742 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.08□□□□□ -1.76
LHX1P48742 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LHX1P48742 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.08□□□□□ -1.76
LHX1P48742 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.08□□□□□ -1.76
LHX1P48742 RAC1P8-201ENST00000427086 527 ntBASIC4.08□□□□□ -1.76
LHX1P48742 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms