Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HNF4AP41235 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.06□□□□□ -1.76
HNF4AP41235 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HNF4AP41235 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.06□□□□□ -1.76
HNF4AP41235 OR1L1-202ENST00000373686 1083 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 MIR141-201ENST00000384975 95 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 GSTA8P-201ENST00000404253 637 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.06□□□□□ -1.76
HNF4AP41235 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.06□□□□□ -1.76
HNF4AP41235 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
HNF4AP41235 AL391219.1-201ENST00000422570 483 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.06□□□□□ -1.76
HNF4AP41235 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.06□□□□□ -1.76
HNF4AP41235 ELOCP8-201ENST00000439309 332 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.06□□□□□ -1.76
HNF4AP41235 ELOCP15-201ENST00000442090 332 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HNF4AP41235 AC004022.1-201ENST00000447766 1066 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.06□□□□□ -1.76
HNF4AP41235 AL133477.1-201ENST00000457472 514 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.06□□□□□ -1.76
HNF4AP41235 AF213884.1-201ENST00000488102 463 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.06□□□□□ -1.76
HNF4AP41235 RPL23AP55-201ENST00000498163 452 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 OR5H5P-201ENST00000503164 928 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.06□□□□□ -1.76
HNF4AP41235 AC098862.1-201ENST00000504991 413 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.06□□□□□ -1.76
HNF4AP41235 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HNF4AP41235 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.06□□□□□ -1.76
HNF4AP41235 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.06□□□□□ -1.76
HNF4AP41235 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.06□□□□□ -1.76
HNF4AP41235 AC006518.2-201ENST00000542513 940 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HNF4AP41235 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.06□□□□□ -1.76
HNF4AP41235 AC023575.1-201ENST00000580510 358 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 KPNA2P3-201ENST00000584190 848 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.06□□□□□ -1.76
HNF4AP41235 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.06□□□□□ -1.76
HNF4AP41235 AC020910.2-201ENST00000603635 610 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 AC025588.3-201ENST00000604182 274 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 DPRXP5-201ENST00000604662 539 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 AC006023.2-201ENST00000609916 167 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 AC064801.1-201ENST00000612025 407 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 AC140725.3-201ENST00000616193 880 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.06□□□□□ -1.76
HNF4AP41235 AP005264.7-201ENST00000625003 745 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.06□□□□□ -1.76
HNF4AP41235 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.06□□□□□ -1.76
HNF4AP41235 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.06□□□□□ -1.76
HNF4AP41235 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HNF4AP41235 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HNF4AP41235 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HNF4AP41235 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HNF4AP41235 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.05□□□□□ -1.76
HNF4AP41235 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HNF4AP41235 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
HNF4AP41235 RNU6-115P-201ENST00000364310 107 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 RNVU1-3-201ENST00000364313 161 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 SNORD6-201ENST00000365444 73 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HNF4AP41235 RNU6-1181P-201ENST00000384191 106 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.05□□□□□ -1.76
HNF4AP41235 RPL31P1-201ENST00000398116 372 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 RPL23AP26-201ENST00000412728 464 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.05□□□□□ -1.76
HNF4AP41235 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.05□□□□□ -1.76
HNF4AP41235 CHIAP3-201ENST00000423668 1133 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 AC093698.1-201ENST00000423843 571 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.05□□□□□ -1.76
HNF4AP41235 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HNF4AP41235 ARF4P4-201ENST00000439608 520 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HNF4AP41235 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.05□□□□□ -1.76
HNF4AP41235 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 AC104073.1-201ENST00000451988 151 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 AC098826.2-201ENST00000452011 651 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HNF4AP41235 RPL21P104-201ENST00000464143 478 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 AC109327.1-201ENST00000471666 403 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 AC041039.1-201ENST00000485656 536 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HNF4AP41235 AC011352.3-201ENST00000505162 593 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.05□□□□□ -1.76
HNF4AP41235 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.05□□□□□ -1.76
HNF4AP41235 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.05□□□□□ -1.76
HNF4AP41235 AC048346.1-201ENST00000510247 144 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 AC008958.1-201ENST00000511047 682 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 RNU6-276P-201ENST00000516114 96 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 RN7SKP244-201ENST00000516513 307 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 AC091163.3-201ENST00000518269 1144 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.05□□□□□ -1.76
HNF4AP41235 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.05□□□□□ -1.76
HNF4AP41235 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.05□□□□□ -1.76
HNF4AP41235 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.05□□□□□ -1.76
HNF4AP41235 AC010735.1-201ENST00000567305 1026 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 MIR378J-201ENST00000611988 109 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 VN1R74P-201ENST00000613259 503 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 MLECP1-201ENST00000615893 709 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms