Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RPL29P29-201ENST00000448725 423 ntBASIC3.35□□□□□ -1.87
RFC3P40938 TVP23BP2-201ENST00000455082 615 ntBASIC3.35□□□□□ -1.87
RFC3P40938 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFC3P40938 TRBV8-2-201ENST00000475637 270 ntBASIC3.35□□□□□ -1.87
RFC3P40938 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.35□□□□□ -1.87
RFC3P40938 SNORA70.18-201ENST00000516696 98 ntBASIC3.35□□□□□ -1.87
RFC3P40938 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.35□□□□□ -1.87
RFC3P40938 MTND2P26-201ENST00000528255 1029 ntBASIC3.35□□□□□ -1.87
RFC3P40938 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.35□□□□□ -1.87
RFC3P40938 OR5B10P-201ENST00000532869 642 ntBASIC3.35□□□□□ -1.87
RFC3P40938 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.35□□□□□ -1.87
RFC3P40938 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.35□□□□□ -1.87
RFC3P40938 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.35□□□□□ -1.87
RFC3P40938 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.35□□□□□ -1.87
RFC3P40938 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.35□□□□□ -1.87
RFC3P40938 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.35□□□□□ -1.87
RFC3P40938 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.35□□□□□ -1.87
RFC3P40938 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.35□□□□□ -1.87
RFC3P40938 AC112503.1-201ENST00000608436 391 ntBASIC3.35□□□□□ -1.87
RFC3P40938 AC022079.2-201ENST00000619739 566 ntBASIC3.35□□□□□ -1.87
RFC3P40938 AC090617.9-201ENST00000623751 147 ntBASIC3.35□□□□□ -1.87
RFC3P40938 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.35□□□□□ -1.87
RFC3P40938 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.35□□□□□ -1.87
RFC3P40938 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.35□□□□□ -1.87
RFC3P40938 FAM157B-203ENST00000639350 358 ntBASIC3.35□□□□□ -1.87
RFC3P40938 SEPT7P7-201ENST00000420492 1301 ntBASIC3.35□□□□□ -1.87
RFC3P40938 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFC3P40938 ZNF542P-204ENST00000482727 1305 ntBASIC3.35□□□□□ -1.87
RFC3P40938 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFC3P40938 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.35□□□□□ -1.87
RFC3P40938 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RFC3P40938 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFC3P40938 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RFC3P40938 AC119744.1-201ENST00000454746 1715 ntBASIC3.34□□□□□ -1.87
RFC3P40938 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.34□□□□□ -1.87
RFC3P40938 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.34□□□□□ -1.87
RFC3P40938 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFC3P40938 SNORD9-201ENST00000362566 104 ntBASIC3.34□□□□□ -1.87
RFC3P40938 RNA5SP167-201ENST00000365461 116 ntBASIC3.34□□□□□ -1.87
RFC3P40938 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
RFC3P40938 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.34□□□□□ -1.87
RFC3P40938 RPS15AP6-201ENST00000420703 385 ntBASIC3.34□□□□□ -1.87
RFC3P40938 RPL31P12-201ENST00000422587 358 ntBASIC3.34□□□□□ -1.87
RFC3P40938 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.34□□□□□ -1.87
RFC3P40938 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RFC3P40938 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.34□□□□□ -1.87
RFC3P40938 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.34□□□□□ -1.87
RFC3P40938 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.34□□□□□ -1.87
RFC3P40938 AC069540.1-201ENST00000446320 988 ntBASIC3.34□□□□□ -1.87
RFC3P40938 MTND5P8-201ENST00000449817 1083 ntBASIC3.34□□□□□ -1.87
RFC3P40938 MTND3P4-201ENST00000453537 303 ntBASIC3.34□□□□□ -1.87
RFC3P40938 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.34□□□□□ -1.87
RFC3P40938 AC078785.3-201ENST00000476607 425 ntBASIC3.34□□□□□ -1.87
RFC3P40938 RN7SL293P-201ENST00000481765 281 ntBASIC3.34□□□□□ -1.87
RFC3P40938 AC126121.1-201ENST00000482313 553 ntBASIC3.34□□□□□ -1.87
RFC3P40938 AC093663.2-201ENST00000484625 313 ntBASIC3.34□□□□□ -1.87
RFC3P40938 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RFC3P40938 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.34□□□□□ -1.87
RFC3P40938 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.34□□□□□ -1.87
RFC3P40938 HMGN1P15-201ENST00000513870 295 ntBASIC3.34□□□□□ -1.87
RFC3P40938 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.34□□□□□ -1.87
RFC3P40938 RN7SKP13-201ENST00000515933 244 ntBASIC3.34□□□□□ -1.87
RFC3P40938 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.34□□□□□ -1.87
RFC3P40938 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.34□□□□□ -1.87
RFC3P40938 AC093331.1-201ENST00000521474 169 ntBASIC3.34□□□□□ -1.87
RFC3P40938 OR8L1P-201ENST00000534005 955 ntBASIC3.34□□□□□ -1.87
RFC3P40938 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.34□□□□□ -1.87
RFC3P40938 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.34□□□□□ -1.87
RFC3P40938 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.34□□□□□ -1.87
RFC3P40938 RN7SL339P-201ENST00000580597 296 ntBASIC3.34□□□□□ -1.87
RFC3P40938 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
RFC3P40938 AL359535.1-201ENST00000612100 1087 ntBASIC3.34□□□□□ -1.87
RFC3P40938 AC121761.2-201ENST00000617300 689 ntBASIC3.34□□□□□ -1.87
RFC3P40938 AL162233.1-201ENST00000620014 944 ntBASIC3.34□□□□□ -1.87
RFC3P40938 U6.107-201ENST00000637108 79 ntBASIC3.34□□□□□ -1.87
RFC3P40938 U6.105-201ENST00000637379 88 ntBASIC3.34□□□□□ -1.87
RFC3P40938 MIR7153-201ENST00000637758 57 ntBASIC3.34□□□□□ -1.87
RFC3P40938 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RFC3P40938 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFC3P40938 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.34□□□□□ -1.87
RFC3P40938 XPOTP1-201ENST00000443317 2398 ntBASIC3.34□□□□□ -1.87
RFC3P40938 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RFC3P40938 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.34□□□□□ -1.87
RFC3P40938 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.34□□□□□ -1.88
RFC3P40938 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.34□□□□□ -1.88
RFC3P40938 AC006504.1-201ENST00000562493 3666 ntBASIC3.34□□□□□ -1.88
RFC3P40938 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
RFC3P40938 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
RFC3P40938 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
RFC3P40938 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFC3P40938 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RFC3P40938 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFC3P40938 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFC3P40938 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFC3P40938 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFC3P40938 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFC3P40938 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RFC3P40938 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RFC3P40938 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.33□□□□□ -1.88
RFC3P40938 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms