Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.53□□□□□ -1.68
COPB2P35606 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COPB2P35606 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COPB2P35606 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COPB2P35606 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.52□□□□□ -1.69
COPB2P35606 RNU6-792P-201ENST00000363490 107 ntBASIC4.52□□□□□ -1.69
COPB2P35606 RNA5SP399-201ENST00000364003 117 ntBASIC4.52□□□□□ -1.69
COPB2P35606 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COPB2P35606 RNU4-27P-201ENST00000410889 139 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AMD1P2-201ENST00000412936 992 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AC007390.1-201ENST00000415722 356 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AL357078.2-201ENST00000416486 427 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB2P35606 AC069157.1-201ENST00000421749 137 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AL391219.1-201ENST00000422570 483 ntBASIC4.52□□□□□ -1.69
COPB2P35606 ELOCP18-201ENST00000434209 337 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.52□□□□□ -1.69
COPB2P35606 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.52□□□□□ -1.69
COPB2P35606 RPL7P47-201ENST00000497299 556 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.52□□□□□ -1.69
COPB2P35606 HMGB3P15-201ENST00000507326 574 ntBASIC4.52□□□□□ -1.69
COPB2P35606 RNA5SP154-201ENST00000516193 111 ntBASIC4.52□□□□□ -1.69
COPB2P35606 RNA5SP164-201ENST00000516533 110 ntBASIC4.52□□□□□ -1.69
COPB2P35606 RN7SKP289-201ENST00000517244 295 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AC026403.1-201ENST00000518938 295 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB2P35606 SYF2P1-201ENST00000550658 413 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB2P35606 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB2P35606 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB2P35606 AC079171.1-201ENST00000568788 914 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AC074051.3-201ENST00000570238 358 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AC087499.8-201ENST00000578406 226 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.52□□□□□ -1.69
COPB2P35606 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.52□□□□□ -1.69
COPB2P35606 AL391497.1-201ENST00000608671 547 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AC107308.1-201ENST00000615897 301 ntBASIC4.52□□□□□ -1.69
COPB2P35606 AC092184.1-201ENST00000625042 715 ntBASIC4.52□□□□□ -1.69
COPB2P35606 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COPB2P35606 AC091948.2-201ENST00000636510 279 ntBASIC4.52□□□□□ -1.69
COPB2P35606 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
COPB2P35606 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COPB2P35606 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COPB2P35606 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
COPB2P35606 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
COPB2P35606 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
COPB2P35606 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.52□□□□□ -1.69
COPB2P35606 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
COPB2P35606 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.51□□□□□ -1.69
COPB2P35606 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COPB2P35606 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COPB2P35606 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
COPB2P35606 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COPB2P35606 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
COPB2P35606 RNA5SP295-201ENST00000362655 121 ntBASIC4.51□□□□□ -1.69
COPB2P35606 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.51□□□□□ -1.69
COPB2P35606 SNORA3C-201ENST00000408792 125 ntBASIC4.51□□□□□ -1.69
COPB2P35606 RNU4-78P-201ENST00000410940 126 ntBASIC4.51□□□□□ -1.69
COPB2P35606 AL158050.1-201ENST00000416077 457 ntBASIC4.51□□□□□ -1.69
COPB2P35606 TOMM22P1-201ENST00000418578 312 ntBASIC4.51□□□□□ -1.69
COPB2P35606 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.51□□□□□ -1.69
COPB2P35606 AL009174.1-201ENST00000426577 416 ntBASIC4.51□□□□□ -1.69
COPB2P35606 MTCO1P54-201ENST00000430139 712 ntBASIC4.51□□□□□ -1.69
COPB2P35606 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.51□□□□□ -1.69
COPB2P35606 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.51□□□□□ -1.69
COPB2P35606 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.51□□□□□ -1.69
COPB2P35606 AL353718.1-201ENST00000451028 517 ntBASIC4.51□□□□□ -1.69
COPB2P35606 snoU13.3-201ENST00000459441 104 ntBASIC4.51□□□□□ -1.69
COPB2P35606 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.51□□□□□ -1.69
COPB2P35606 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.51□□□□□ -1.69
COPB2P35606 MTCO3P35-201ENST00000485582 781 ntBASIC4.51□□□□□ -1.69
COPB2P35606 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.51□□□□□ -1.69
COPB2P35606 AC093853.1-201ENST00000515689 483 ntBASIC4.51□□□□□ -1.69
COPB2P35606 IGKV2D-19-201ENST00000523346 262 ntBASIC4.51□□□□□ -1.69
COPB2P35606 AC011611.5-201ENST00000552477 578 ntBASIC4.51□□□□□ -1.69
COPB2P35606 AC010735.1-201ENST00000567305 1026 ntBASIC4.51□□□□□ -1.69
COPB2P35606 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.51□□□□□ -1.69
COPB2P35606 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.51□□□□□ -1.69
COPB2P35606 BPTFP1-201ENST00000579209 492 ntBASIC4.51□□□□□ -1.69
COPB2P35606 AC008638.3-201ENST00000603341 463 ntBASIC4.51□□□□□ -1.69
COPB2P35606 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.51□□□□□ -1.69
COPB2P35606 AC106730.3-201ENST00000624568 641 ntBASIC4.51□□□□□ -1.69
COPB2P35606 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COPB2P35606 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COPB2P35606 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
COPB2P35606 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COPB2P35606 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
COPB2P35606 RNA5SP119-201ENST00000362715 117 ntBASIC4.5□□□□□ -1.69
COPB2P35606 RNU6-263P-201ENST00000363811 107 ntBASIC4.5□□□□□ -1.69
COPB2P35606 U1.1-201ENST00000384101 164 ntBASIC4.5□□□□□ -1.69
COPB2P35606 MIR93-201ENST00000385024 80 ntBASIC4.5□□□□□ -1.69
COPB2P35606 RPL31P1-201ENST00000398116 372 ntBASIC4.5□□□□□ -1.69
COPB2P35606 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.5□□□□□ -1.69
COPB2P35606 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.5□□□□□ -1.69
COPB2P35606 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.5□□□□□ -1.69
COPB2P35606 AL139247.1-201ENST00000422768 325 ntBASIC4.5□□□□□ -1.69
COPB2P35606 AC233981.1-201ENST00000423224 461 ntBASIC4.5□□□□□ -1.69
COPB2P35606 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.5□□□□□ -1.69
COPB2P35606 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.5□□□□□ -1.69
COPB2P35606 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms