Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.75□□□□□ -1.81
SCN4AP35499 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.75□□□□□ -1.81
SCN4AP35499 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN4AP35499 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN4AP35499 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.75□□□□□ -1.81
SCN4AP35499 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.75□□□□□ -1.81
SCN4AP35499 AC087241.4-201ENST00000612441 480 ntBASIC3.75□□□□□ -1.81
SCN4AP35499 AL590808.1-201ENST00000618696 141 ntBASIC3.75□□□□□ -1.81
SCN4AP35499 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.75□□□□□ -1.81
SCN4AP35499 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SCN4AP35499 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.75□□□□□ -1.81
SCN4AP35499 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SCN4AP35499 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.75□□□□□ -1.81
SCN4AP35499 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.75□□□□□ -1.81
SCN4AP35499 AL391417.1-201ENST00000404100 426 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 HSPE1P8-201ENST00000406997 288 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN4AP35499 SKP1P1-201ENST00000438081 489 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN4AP35499 AC008264.1-201ENST00000447612 367 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 AL513124.1-201ENST00000450410 614 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 RPL23AP67-201ENST00000465341 474 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 TRBV12-1-201ENST00000479785 344 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN4AP35499 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN4AP35499 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN4AP35499 MIR4425-201ENST00000580572 84 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 RMST_8.1-201ENST00000610287 165 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 AC099506.2-201ENST00000623074 221 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN4AP35499 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN4AP35499 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN4AP35499 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SCN4AP35499 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN4AP35499 SNORA70B-201ENST00000384210 135 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 MTCO3P20-201ENST00000454926 688 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN4AP35499 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN4AP35499 AC017037.2-201ENST00000513850 890 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 RNU6-1334P-201ENST00000516032 105 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN4AP35499 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN4AP35499 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.74□□□□□ -1.81
SCN4AP35499 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN4AP35499 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN4AP35499 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN4AP35499 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN4AP35499 AL137072.1-201ENST00000603444 466 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 BRDTP1-201ENST00000605735 677 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 AL096803.3-201ENST00000609032 532 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN4AP35499 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.74□□□□□ -1.81
SCN4AP35499 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN4AP35499 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SCN4AP35499 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SCN4AP35499 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.73□□□□□ -1.81
SCN4AP35499 RPL30P2-201ENST00000414021 291 ntBASIC3.73□□□□□ -1.81
SCN4AP35499 AC003685.2-201ENST00000422795 395 ntBASIC3.73□□□□□ -1.81
SCN4AP35499 RPS6P12-201ENST00000432491 726 ntBASIC3.73□□□□□ -1.81
SCN4AP35499 BTG3P1-201ENST00000435859 716 ntBASIC3.73□□□□□ -1.81
SCN4AP35499 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.73□□□□□ -1.81
SCN4AP35499 AC108938.1-201ENST00000451204 136 ntBASIC3.73□□□□□ -1.81
SCN4AP35499 RPS4XP22-201ENST00000480755 780 ntBASIC3.73□□□□□ -1.81
SCN4AP35499 ACTG1P13-201ENST00000486987 1043 ntBASIC3.73□□□□□ -1.81
SCN4AP35499 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.73□□□□□ -1.81
SCN4AP35499 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.73□□□□□ -1.81
SCN4AP35499 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
SCN4AP35499 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SCN4AP35499 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SCN4AP35499 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SCN4AP35499 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SCN4AP35499 OR13C3-201ENST00000374781 1108 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN4AP35499 AL136116.1-201ENST00000403591 381 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 AL589994.1-201ENST00000404962 340 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 AL512430.2-201ENST00000406786 339 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 AC126124.2-201ENST00000413542 321 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.72□□□□□ -1.81
SCN4AP35499 TOMM20P4-201ENST00000427861 435 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 RPL21P112-201ENST00000434403 463 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 HMGB3P8-201ENST00000449709 577 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN4AP35499 RPS20P32-201ENST00000456044 356 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 UBL5P3-201ENST00000475112 231 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 PRELID3BP7-201ENST00000503606 469 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN4AP35499 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.72□□□□□ -1.81
SCN4AP35499 MIR4524B-201ENST00000581569 115 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.72□□□□□ -1.81
SCN4AP35499 AC009948.4-201ENST00000604692 675 ntBASIC3.72□□□□□ -1.81
SCN4AP35499 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SCN4AP35499 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN4AP35499 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN4AP35499 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN4AP35499 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.72□□□□□ -1.81
SCN4AP35499 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN4AP35499 AL451142.2-201ENST00000429076 2090 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms