Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.52□□□□□ -1.85
SHMT2P34897 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.52□□□□□ -1.85
SHMT2P34897 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.52□□□□□ -1.85
SHMT2P34897 AC010591.1-201ENST00000603941 649 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.52□□□□□ -1.85
SHMT2P34897 RMST_10.1-201ENST00000616309 154 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 AC243756.2-201ENST00000618406 463 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 AC069209.1-201ENST00000619282 651 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SHMT2P34897 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.52□□□□□ -1.85
SHMT2P34897 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHMT2P34897 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHMT2P34897 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHMT2P34897 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.51□□□□□ -1.85
SHMT2P34897 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHMT2P34897 RIOK3P1-201ENST00000418778 1528 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHMT2P34897 ENSAP3-201ENST00000312710 333 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 Y_RNA.110-201ENST00000363220 99 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 SNORA48.7-201ENST00000391302 135 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 ATP5F1P3-201ENST00000397213 657 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 ATP5F1P6-201ENST00000402768 767 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 MTHFD2P2-201ENST00000407725 247 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 RNU2-65P-201ENST00000410162 185 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AL445183.3-201ENST00000414168 502 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.51□□□□□ -1.85
SHMT2P34897 ETF1P3-201ENST00000430422 1160 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 GOT2P5-201ENST00000433995 546 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 NDUFB1P1-201ENST00000435191 180 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AL645931.1-201ENST00000439737 410 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.51□□□□□ -1.85
SHMT2P34897 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.51□□□□□ -1.85
SHMT2P34897 AC073387.1-201ENST00000453261 709 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AC096992.1-201ENST00000459808 709 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 RPL7L1P8-201ENST00000469911 741 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.51□□□□□ -1.85
SHMT2P34897 TMED11P-201ENST00000479478 690 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.51□□□□□ -1.85
SHMT2P34897 AC012170.1-201ENST00000495139 359 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 MTATP6P22-201ENST00000507369 598 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AC008628.1-201ENST00000508663 265 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AC008565.1-201ENST00000509046 885 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.51□□□□□ -1.85
SHMT2P34897 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHMT2P34897 AC104619.4-201ENST00000510773 249 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AP003049.1-201ENST00000529418 457 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AP000916.1-201ENST00000533869 835 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.51□□□□□ -1.85
SHMT2P34897 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.51□□□□□ -1.85
SHMT2P34897 AL161713.1-201ENST00000555538 145 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 KLKP1-201ENST00000595979 403 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AC092474.3-201ENST00000603022 568 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AC005776.1-201ENST00000603164 290 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 SNORA51-201ENST00000606420 132 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 MIR8084-201ENST00000614105 89 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.51□□□□□ -1.85
SHMT2P34897 AC006213.5-201ENST00000619673 288 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.51□□□□□ -1.85
SHMT2P34897 AC119674.1-207ENST00000641355 633 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 AL732372.2-225ENST00000642124 456 ntBASIC3.51□□□□□ -1.85
SHMT2P34897 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHMT2P34897 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHMT2P34897 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHMT2P34897 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHMT2P34897 AC104446.1-201ENST00000613728 1321 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHMT2P34897 AC138393.1-206ENST00000540997 1886 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHMT2P34897 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHMT2P34897 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.5□□□□□ -1.85
SHMT2P34897 SNORD9-201ENST00000362566 104 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 RNA5SP27-201ENST00000363839 119 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 RNU6-609P-201ENST00000365459 107 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SHMT2P34897 RNU6-328P-201ENST00000390887 106 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 SNORA11-201ENST00000408789 128 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 RN7SKP285-201ENST00000410137 318 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 RNU2-72P-201ENST00000411175 163 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC009237.5-201ENST00000414271 501 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 SYF2P2-201ENST00000417620 583 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC092832.1-201ENST00000422934 400 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC073310.1-201ENST00000423226 1033 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.5□□□□□ -1.85
SHMT2P34897 AL050321.1-201ENST00000432363 400 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC023347.2-201ENST00000433994 462 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 ARL4AP4-201ENST00000434170 518 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 MRPS18BP2-201ENST00000434310 759 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.5□□□□□ -1.85
SHMT2P34897 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.5□□□□□ -1.85
SHMT2P34897 CYCSP20-201ENST00000473154 315 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC106707.2-201ENST00000484182 374 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC005726.1-201ENST00000494679 427 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.5□□□□□ -1.85
SHMT2P34897 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.5□□□□□ -1.85
SHMT2P34897 ARL2BPP6-201ENST00000512757 439 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHMT2P34897 RN7SKP283-201ENST00000517197 270 ntBASIC3.5□□□□□ -1.85
SHMT2P34897 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.5□□□□□ -1.85
SHMT2P34897 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.5□□□□□ -1.85
SHMT2P34897 AC022790.1-201ENST00000522872 204 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms