Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.53□□□□□ -1.68
EPHA3P29320 BNIP3P23-201ENST00000599655 511 ntBASIC4.53□□□□□ -1.68
EPHA3P29320 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
EPHA3P29320 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.53□□□□□ -1.68
EPHA3P29320 AC027807.2-201ENST00000616099 408 ntBASIC4.53□□□□□ -1.68
EPHA3P29320 AC006338.2-201ENST00000616864 791 ntBASIC4.53□□□□□ -1.68
EPHA3P29320 AP001005.3-201ENST00000622049 129 ntBASIC4.53□□□□□ -1.68
EPHA3P29320 AC055839.1-201ENST00000634467 498 ntBASIC4.53□□□□□ -1.68
EPHA3P29320 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.53□□□□□ -1.68
EPHA3P29320 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
EPHA3P29320 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
EPHA3P29320 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
EPHA3P29320 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
EPHA3P29320 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
EPHA3P29320 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHA3P29320 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
EPHA3P29320 AL590763.1-201ENST00000398297 1545 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
EPHA3P29320 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHA3P29320 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHA3P29320 AC068254.2-201ENST00000623938 3577 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHA3P29320 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
EPHA3P29320 Y_RNA.3-201ENST00000362331 103 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 RNA5SP151-201ENST00000365632 117 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHA3P29320 SNORA51.6-201ENST00000384151 125 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 DHFRP6-201ENST00000401776 268 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.52□□□□□ -1.69
EPHA3P29320 AL512430.2-201ENST00000406786 339 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.52□□□□□ -1.69
EPHA3P29320 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 PDSS1P1-201ENST00000422953 1114 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 RPL21P91-201ENST00000429231 479 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 PRELID3BP10-201ENST00000431957 584 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.52□□□□□ -1.69
EPHA3P29320 LSM1P1-201ENST00000438629 273 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 AC092641.1-201ENST00000440229 772 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.52□□□□□ -1.69
EPHA3P29320 AL592447.1-201ENST00000447592 540 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 SLC25A18P1-201ENST00000449385 454 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 SSXP1-201ENST00000453640 473 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 RN7SL172P-201ENST00000460535 303 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 RPL7P22-201ENST00000466005 733 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 RPS26P39-201ENST00000469206 341 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 RPL23AP65-201ENST00000475608 468 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 AC011825.1-201ENST00000484967 388 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.52□□□□□ -1.69
EPHA3P29320 AC108022.1-201ENST00000493466 478 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 AC140172.1-201ENST00000502928 141 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.52□□□□□ -1.69
EPHA3P29320 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.52□□□□□ -1.69
EPHA3P29320 ARL2BPP4-201ENST00000506854 471 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.52□□□□□ -1.69
EPHA3P29320 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.52□□□□□ -1.69
EPHA3P29320 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
EPHA3P29320 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.52□□□□□ -1.69
EPHA3P29320 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.52□□□□□ -1.69
EPHA3P29320 RNA5SP360-201ENST00000516555 118 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 AC025881.1-201ENST00000518851 512 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 IGHV3-32-201ENST00000519182 355 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.52□□□□□ -1.69
EPHA3P29320 AC013828.2-201ENST00000532487 235 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.52□□□□□ -1.69
EPHA3P29320 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.52□□□□□ -1.69
EPHA3P29320 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.52□□□□□ -1.69
EPHA3P29320 MIR4489-201ENST00000578869 62 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.52□□□□□ -1.69
EPHA3P29320 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.52□□□□□ -1.69
EPHA3P29320 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.52□□□□□ -1.69
EPHA3P29320 RPL7P50-201ENST00000600588 727 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 AL133338.2-201ENST00000604292 736 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 AC008966.2-201ENST00000606157 453 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 AP001521.2-201ENST00000608772 546 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 Z99129.1-201ENST00000612510 255 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 AC068722.2-201ENST00000618734 544 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.52□□□□□ -1.69
EPHA3P29320 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.52□□□□□ -1.69
EPHA3P29320 AL359740.1-201ENST00000624340 592 ntBASIC4.52□□□□□ -1.69
EPHA3P29320 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.52□□□□□ -1.69
EPHA3P29320 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
EPHA3P29320 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.52□□□□□ -1.69
EPHA3P29320 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHA3P29320 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHA3P29320 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHA3P29320 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHA3P29320 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
EPHA3P29320 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EPHA3P29320 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EPHA3P29320 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EPHA3P29320 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.51□□□□□ -1.69
EPHA3P29320 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EPHA3P29320 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
EPHA3P29320 Y_RNA.97-201ENST00000363094 102 ntBASIC4.51□□□□□ -1.69
EPHA3P29320 RNU6-289P-201ENST00000364093 107 ntBASIC4.51□□□□□ -1.69
EPHA3P29320 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EPHA3P29320 AC069218.2-201ENST00000411665 344 ntBASIC4.51□□□□□ -1.69
EPHA3P29320 RPL17P12-201ENST00000413391 526 ntBASIC4.51□□□□□ -1.69
EPHA3P29320 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms