Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 AC146507.1-201ENST00000468335 354 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 AC025518.1-201ENST00000479856 347 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD10P28358 RPL7P24-201ENST00000493052 752 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 AC078918.1-201ENST00000498515 228 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD10P28358 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD10P28358 AC010285.3-201ENST00000511668 676 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 AC010342.1-201ENST00000514047 877 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD10P28358 RNU6-889P-201ENST00000517189 103 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD10P28358 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD10P28358 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 CYP4A43P-201ENST00000568156 121 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 LARP7P3-201ENST00000579888 337 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD10P28358 AL034351.1-201ENST00000605288 668 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 MIR7112-201ENST00000616126 65 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD10P28358 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD10P28358 AC018555.1-201ENST00000567548 1980 ntBASIC4.12□□□□□ -1.75
HOXD10P28358 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD10P28358 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD10P28358 TNPO1P3-201ENST00000436471 2662 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 LINC02471-203ENST00000641941 4752 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 AL353743.1-202ENST00000431724 1695 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD10P28358 AC069218.2-201ENST00000411665 344 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD10P28358 CBX1P4-201ENST00000439415 457 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 BTBD7P2-201ENST00000441962 620 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXD10P28358 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
HOXD10P28358 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD10P28358 AC084198.1-201ENST00000477747 402 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 OR52A4P-202ENST00000481634 799 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXD10P28358 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXD10P28358 PTGES3P3-201ENST00000511479 482 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXD10P28358 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXD10P28358 OR5D17P-201ENST00000531492 978 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD10P28358 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD10P28358 AL133247.2-201ENST00000603236 482 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 AC006254.3-201ENST00000603353 884 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 AL390816.3-201ENST00000604527 1066 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 AC011816.2-201ENST00000607089 556 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 AL354696.1-201ENST00000614652 497 ntBASIC4.11□□□□□ -1.75
HOXD10P28358 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXD10P28358 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HOXD10P28358 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HOXD10P28358 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HOXD10P28358 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
HOXD10P28358 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD10P28358 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXD10P28358 RNU6-40P-201ENST00000384254 107 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 RNU6-31P-201ENST00000384388 108 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 RHEBP3-201ENST00000411920 351 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 COTL1P1-201ENST00000422309 375 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 OR5AW1P-201ENST00000426334 1006 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 HIGD1AP12-201ENST00000427832 281 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD10P28358 AC087650.1-201ENST00000431445 468 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXD10P28358 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXD10P28358 AC089999.1-201ENST00000460336 374 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 HMGB1P47-201ENST00000511281 589 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 OR5M7P-201ENST00000526140 972 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD10P28358 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD10P28358 AC135803.1-201ENST00000608748 565 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 U7.8-201ENST00000619968 63 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 AC079684.1-201ENST00000621405 437 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD10P28358 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
HOXD10P28358 AL359715.4-201ENST00000606629 1436 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD10P28358 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD10P28358 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD10P28358 AL353743.4-201ENST00000422653 1547 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 AL035425.3-201ENST00000564206 4996 ntBASIC4.1□□□□□ -1.75
HOXD10P28358 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXD10P28358 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXD10P28358 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXD10P28358 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXD10P28358 MIR513A2-201ENST00000385249 127 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 HMGB1P10-201ENST00000395823 563 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 RPL26P37-201ENST00000411983 438 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 MTND4P11-201ENST00000417020 1058 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 NDUFA5P10-201ENST00000432147 357 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 AC105402.2-201ENST00000438503 358 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 MTCYBP31-201ENST00000438855 1122 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXD10P28358 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXD10P28358 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXD10P28358 AC093770.1-201ENST00000511559 571 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 SNORA70.18-201ENST00000516696 98 ntBASIC4.09□□□□□ -1.75
HOXD10P28358 OR6C73P-201ENST00000546432 358 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms