Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RN7SL610P-201ENST00000463845 291 ntBASIC6.47□□□□□ -1.37
RFX1P22670 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFX1P22670 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.47□□□□□ -1.37
RFX1P22670 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.47□□□□□ -1.37
RFX1P22670 PSMA2P1-201ENST00000526365 646 ntBASIC6.47□□□□□ -1.37
RFX1P22670 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFX1P22670 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC6.47□□□□□ -1.37
RFX1P22670 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.47□□□□□ -1.37
RFX1P22670 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.47□□□□□ -1.37
RFX1P22670 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.47□□□□□ -1.37
RFX1P22670 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.47□□□□□ -1.37
RFX1P22670 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.47□□□□□ -1.37
RFX1P22670 AC005341.1-201ENST00000571086 708 ntBASIC6.47□□□□□ -1.37
RFX1P22670 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.47□□□□□ -1.37
RFX1P22670 AC011477.5-201ENST00000586571 259 ntBASIC6.47□□□□□ -1.37
RFX1P22670 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.47□□□□□ -1.37
RFX1P22670 uc_338.5-201ENST00000611839 155 ntBASIC6.47□□□□□ -1.37
RFX1P22670 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.47□□□□□ -1.37
RFX1P22670 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFX1P22670 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFX1P22670 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFX1P22670 STX3-208ENST00000641815 3236 ntBASIC6.47□□□□□ -1.37
RFX1P22670 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFX1P22670 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.47□□□□□ -1.37
RFX1P22670 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RFX1P22670 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFX1P22670 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RFX1P22670 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RFX1P22670 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
RFX1P22670 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
RFX1P22670 Y_RNA.22-201ENST00000362492 102 ntBASIC6.46□□□□□ -1.38
RFX1P22670 RNU5E-8P-201ENST00000363502 116 ntBASIC6.46□□□□□ -1.38
RFX1P22670 MIR143-201ENST00000385300 106 ntBASIC6.46□□□□□ -1.38
RFX1P22670 RPL32P23-201ENST00000397237 405 ntBASIC6.46□□□□□ -1.38
RFX1P22670 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.46□□□□□ -1.38
RFX1P22670 SDHDP6-201ENST00000414693 480 ntBASIC6.46□□□□□ -1.38
RFX1P22670 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.46□□□□□ -1.38
RFX1P22670 AF228730.4-201ENST00000421457 183 ntBASIC6.46□□□□□ -1.38
RFX1P22670 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.46□□□□□ -1.38
RFX1P22670 AC092651.1-201ENST00000426110 312 ntBASIC6.46□□□□□ -1.38
RFX1P22670 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.46□□□□□ -1.38
RFX1P22670 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.46□□□□□ -1.38
RFX1P22670 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.46□□□□□ -1.38
RFX1P22670 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.46□□□□□ -1.38
RFX1P22670 AC002553.2-201ENST00000453217 340 ntBASIC6.46□□□□□ -1.38
RFX1P22670 RNU7-59P-201ENST00000459101 61 ntBASIC6.46□□□□□ -1.38
RFX1P22670 AC126389.1-201ENST00000477436 290 ntBASIC6.46□□□□□ -1.38
RFX1P22670 AC020893.1-201ENST00000502452 580 ntBASIC6.46□□□□□ -1.38
RFX1P22670 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.46□□□□□ -1.38
RFX1P22670 ATP5LP3-201ENST00000514223 304 ntBASIC6.46□□□□□ -1.38
RFX1P22670 AC112206.3-201ENST00000514578 389 ntBASIC6.46□□□□□ -1.38
RFX1P22670 RNU2-10P-201ENST00000516375 211 ntBASIC6.46□□□□□ -1.38
RFX1P22670 RNA5SP438-201ENST00000516561 112 ntBASIC6.46□□□□□ -1.38
RFX1P22670 AC008627.1-201ENST00000517511 1704 ntBASIC6.46□□□□□ -1.38
RFX1P22670 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.46□□□□□ -1.38
RFX1P22670 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.46□□□□□ -1.38
RFX1P22670 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.46□□□□□ -1.38
RFX1P22670 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.46□□□□□ -1.38
RFX1P22670 AL355375.2-201ENST00000574825 175 ntBASIC6.46□□□□□ -1.38
RFX1P22670 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC6.46□□□□□ -1.38
RFX1P22670 MIR4420-201ENST00000583944 77 ntBASIC6.46□□□□□ -1.38
RFX1P22670 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.46□□□□□ -1.38
RFX1P22670 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RFX1P22670 AC007687.1-201ENST00000602704 304 ntBASIC6.46□□□□□ -1.38
RFX1P22670 AL138960.1-201ENST00000613838 513 ntBASIC6.46□□□□□ -1.38
RFX1P22670 AC090617.10-201ENST00000624308 134 ntBASIC6.46□□□□□ -1.38
RFX1P22670 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC6.46□□□□□ -1.38
RFX1P22670 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.46□□□□□ -1.38
RFX1P22670 TPTEP1-208ENST00000636884 213 ntBASIC6.46□□□□□ -1.38
RFX1P22670 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RFX1P22670 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RFX1P22670 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.46□□□□□ -1.38
RFX1P22670 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RFX1P22670 AC004972.1-201ENST00000623934 2209 ntBASIC6.46□□□□□ -1.38
RFX1P22670 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RFX1P22670 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RFX1P22670 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.46□□□□□ -1.38
RFX1P22670 AC002525.1-201ENST00000624392 1622 ntBASIC6.46□□□□□ -1.38
RFX1P22670 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RFX1P22670 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.45□□□□□ -1.38
RFX1P22670 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
RFX1P22670 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
RFX1P22670 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RFX1P22670 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX1P22670 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RFX1P22670 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.45□□□□□ -1.38
RFX1P22670 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX1P22670 DHX40P1-201ENST00000588725 1412 ntBASIC6.45□□□□□ -1.38
RFX1P22670 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RFX1P22670 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFX1P22670 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFX1P22670 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFX1P22670 RNU6-178P-201ENST00000384631 104 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AL590004.1-201ENST00000405321 300 ntBASIC6.45□□□□□ -1.38
RFX1P22670 RNU6-193P-201ENST00000410977 107 ntBASIC6.45□□□□□ -1.38
RFX1P22670 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.45□□□□□ -1.38
RFX1P22670 USP9YP20-201ENST00000419224 558 ntBASIC6.45□□□□□ -1.38
RFX1P22670 RPL30P3-201ENST00000424262 333 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AC113412.1-201ENST00000425840 504 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms