Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 ELOCP23-201ENST00000452014 332 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 NPM1P13-201ENST00000452663 865 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.05□□□□□ -1.92
COL5A1P20908 AC111000.5-201ENST00000506559 1178 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.05□□□□□ -1.92
COL5A1P20908 RNU6-1334P-201ENST00000516032 105 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.05□□□□□ -1.92
COL5A1P20908 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.05□□□□□ -1.92
COL5A1P20908 AC091544.4-201ENST00000555268 342 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.05□□□□□ -1.92
COL5A1P20908 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.05□□□□□ -1.92
COL5A1P20908 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.05□□□□□ -1.92
COL5A1P20908 NRBF2P5-201ENST00000603087 788 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A1P20908 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.05□□□□□ -1.92
COL5A1P20908 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.04□□□□□ -1.92
COL5A1P20908 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
COL5A1P20908 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL5A1P20908 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.04□□□□□ -1.92
COL5A1P20908 AC073325.2-201ENST00000339545 159 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 XGY1-201ENST00000381172 446 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 RPL31P12-201ENST00000422587 358 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 AC003685.2-201ENST00000422795 395 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 SETP10-201ENST00000424368 814 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 UBE2V2P3-201ENST00000433562 437 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.04□□□□□ -1.92
COL5A1P20908 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.04□□□□□ -1.92
COL5A1P20908 SLC31A1P1-201ENST00000451221 567 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.04□□□□□ -1.92
COL5A1P20908 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.04□□□□□ -1.92
COL5A1P20908 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.04□□□□□ -1.92
COL5A1P20908 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.04□□□□□ -1.92
COL5A1P20908 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.04□□□□□ -1.92
COL5A1P20908 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.04□□□□□ -1.92
COL5A1P20908 RN7SKP132-201ENST00000516001 208 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 SNORA48.9-201ENST00000516419 162 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.04□□□□□ -1.92
COL5A1P20908 TGIF1P1-201ENST00000558095 802 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 MIR4319-201ENST00000577285 85 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.04□□□□□ -1.92
COL5A1P20908 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL5A1P20908 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
COL5A1P20908 AC007342.9-201ENST00000623877 1385 ntBASIC3.04□□□□□ -1.92
COL5A1P20908 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.04□□□□□ -1.92
COL5A1P20908 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL5A1P20908 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
COL5A1P20908 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL5A1P20908 RN7SKP220-201ENST00000410611 288 ntBASIC3.03□□□□□ -1.92
COL5A1P20908 AMD1P2-201ENST00000412936 992 ntBASIC3.03□□□□□ -1.92
COL5A1P20908 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.03□□□□□ -1.92
COL5A1P20908 FAR1P1-201ENST00000427163 934 ntBASIC3.03□□□□□ -1.92
COL5A1P20908 RPL21P112-201ENST00000434403 463 ntBASIC3.03□□□□□ -1.92
COL5A1P20908 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.03□□□□□ -1.92
COL5A1P20908 AC026616.1-201ENST00000523157 525 ntBASIC3.03□□□□□ -1.92
COL5A1P20908 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL5A1P20908 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.03□□□□□ -1.92
COL5A1P20908 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.03□□□□□ -1.92
COL5A1P20908 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.03□□□□□ -1.92
COL5A1P20908 AC090953.1-201ENST00000604305 1092 ntBASIC3.03□□□□□ -1.92
COL5A1P20908 AC009948.4-201ENST00000604692 675 ntBASIC3.03□□□□□ -1.92
COL5A1P20908 AC110741.2-201ENST00000605278 268 ntBASIC3.03□□□□□ -1.92
COL5A1P20908 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.03□□□□□ -1.92
COL5A1P20908 AC139713.2-210ENST00000641741 992 ntBASIC3.03□□□□□ -1.92
COL5A1P20908 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.03□□□□□ -1.92
COL5A1P20908 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
COL5A1P20908 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL5A1P20908 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.03□□□□□ -1.92
COL5A1P20908 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
COL5A1P20908 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.03□□□□□ -1.93
COL5A1P20908 NUP35P1-201ENST00000422734 947 ntBASIC3.03□□□□□ -1.93
COL5A1P20908 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
COL5A1P20908 AC006539.3-201ENST00000454258 129 ntBASIC3.03□□□□□ -1.93
COL5A1P20908 AC107015.1-201ENST00000466902 747 ntBASIC3.03□□□□□ -1.93
COL5A1P20908 RNU6-964P-201ENST00000516524 69 ntBASIC3.03□□□□□ -1.93
COL5A1P20908 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.03□□□□□ -1.93
COL5A1P20908 AC010306.1-201ENST00000523223 1117 ntBASIC3.03□□□□□ -1.93
COL5A1P20908 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.03□□□□□ -1.93
COL5A1P20908 AC092851.1-201ENST00000535964 478 ntBASIC3.03□□□□□ -1.93
COL5A1P20908 HMGB1P6-201ENST00000569046 646 ntBASIC3.03□□□□□ -1.93
COL5A1P20908 VN1R90P-201ENST00000595717 726 ntBASIC3.03□□□□□ -1.93
COL5A1P20908 AC087241.4-201ENST00000612441 480 ntBASIC3.03□□□□□ -1.93
COL5A1P20908 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL5A1P20908 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.02□□□□□ -1.93
COL5A1P20908 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.02□□□□□ -1.93
COL5A1P20908 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
COL5A1P20908 AC021755.1-201ENST00000559747 1447 ntBASIC3.02□□□□□ -1.93
COL5A1P20908 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL5A1P20908 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
COL5A1P20908 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL5A1P20908 MIR423-201ENST00000362201 94 ntBASIC3.02□□□□□ -1.93
COL5A1P20908 HMGB3P18-201ENST00000406327 590 ntBASIC3.02□□□□□ -1.93
COL5A1P20908 RPL30P2-201ENST00000414021 291 ntBASIC3.02□□□□□ -1.93
COL5A1P20908 BTF3P9-201ENST00000418784 283 ntBASIC3.02□□□□□ -1.93
COL5A1P20908 Z93242.1-201ENST00000427102 353 ntBASIC3.02□□□□□ -1.93
COL5A1P20908 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
COL5A1P20908 PPIAP17-201ENST00000438507 471 ntBASIC3.02□□□□□ -1.93
COL5A1P20908 AC011602.1-201ENST00000546484 331 ntBASIC3.02□□□□□ -1.93
COL5A1P20908 MIR4524B-201ENST00000581569 115 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms