Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU1-112P-201ENST00000364401 164 ntBASIC5.05□□□□□ -1.6
TOP2AP11388 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.05□□□□□ -1.6
TOP2AP11388 AL139039.1-201ENST00000401900 692 ntBASIC5.05□□□□□ -1.6
TOP2AP11388 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.05□□□□□ -1.6
TOP2AP11388 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.05□□□□□ -1.6
TOP2AP11388 OR5H3P-201ENST00000502817 919 ntBASIC5.05□□□□□ -1.6
TOP2AP11388 AC114781.4-201ENST00000513707 639 ntBASIC5.05□□□□□ -1.6
TOP2AP11388 SCGB1D5P-201ENST00000515134 247 ntBASIC5.05□□□□□ -1.6
TOP2AP11388 FABP5P12-201ENST00000515543 389 ntBASIC5.05□□□□□ -1.6
TOP2AP11388 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.05□□□□□ -1.6
TOP2AP11388 AC007954.1-201ENST00000554198 494 ntBASIC5.05□□□□□ -1.6
TOP2AP11388 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.05□□□□□ -1.6
TOP2AP11388 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.05□□□□□ -1.6
TOP2AP11388 AC000123.3-201ENST00000624029 4975 ntBASIC5.05□□□□□ -1.6
TOP2AP11388 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC5.05□□□□□ -1.6
TOP2AP11388 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC5.04□□□□□ -1.6
TOP2AP11388 AC005332.5-201ENST00000591222 2919 ntBASIC5.04□□□□□ -1.6
TOP2AP11388 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.04□□□□□ -1.6
TOP2AP11388 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.04□□□□□ -1.6
TOP2AP11388 RNA5SP432-201ENST00000362480 116 ntBASIC5.04□□□□□ -1.6
TOP2AP11388 AL121890.1-201ENST00000435457 205 ntBASIC5.04□□□□□ -1.6
TOP2AP11388 AL162389.1-201ENST00000449233 177 ntBASIC5.04□□□□□ -1.6
TOP2AP11388 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.04□□□□□ -1.6
TOP2AP11388 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TOP2AP11388 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.03□□□□□ -1.6
TOP2AP11388 AL139413.1-201ENST00000421309 217 ntBASIC5.03□□□□□ -1.6
TOP2AP11388 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.03□□□□□ -1.6
TOP2AP11388 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP2AP11388 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP2AP11388 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP2AP11388 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP2AP11388 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.03□□□□□ -1.6
TOP2AP11388 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TOP2AP11388 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TOP2AP11388 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
TOP2AP11388 RNU4-44P-201ENST00000363050 141 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 OR2AS1P-201ENST00000427827 319 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 AL035413.2-201ENST00000604801 525 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 MIR6715A-201ENST00000615929 79 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 AL356490.1-201ENST00000623079 479 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 AC010149.2-201ENST00000637608 315 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.02□□□□□ -1.61
TOP2AP11388 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TOP2AP11388 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TOP2AP11388 AL445529.1-201ENST00000398713 389 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 RHEBP3-201ENST00000411920 351 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 FAR1P1-201ENST00000427163 934 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 AC007563.3-201ENST00000433233 371 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 RAB6C-AS1-202ENST00000433431 123 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 AP000936.2-201ENST00000447151 681 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.02□□□□□ -1.61
TOP2AP11388 AP001025.2-201ENST00000490908 477 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 AL591516.1-201ENST00000611326 274 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 AL122125.1-201ENST00000616999 600 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 ELL2P4-201ENST00000446870 1376 ntBASIC5.02□□□□□ -1.61
TOP2AP11388 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
TOP2AP11388 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TOP2AP11388 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TOP2AP11388 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.01□□□□□ -1.61
TOP2AP11388 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TOP2AP11388 MIR184-201ENST00000384962 84 ntBASIC5.01□□□□□ -1.61
TOP2AP11388 AL138827.1-201ENST00000402666 306 ntBASIC5.01□□□□□ -1.61
TOP2AP11388 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TOP2AP11388 RN7SKP58-201ENST00000411010 305 ntBASIC5.01□□□□□ -1.61
TOP2AP11388 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TOP2AP11388 RPL21P112-201ENST00000434403 463 ntBASIC5.01□□□□□ -1.61
TOP2AP11388 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.01□□□□□ -1.61
TOP2AP11388 RN7SKP60-201ENST00000516985 239 ntBASIC5.01□□□□□ -1.61
TOP2AP11388 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TOP2AP11388 AC009097.3-201ENST00000563557 1018 ntBASIC5.01□□□□□ -1.61
TOP2AP11388 AL365503.1-201ENST00000605247 905 ntBASIC5.01□□□□□ -1.61
TOP2AP11388 RMST_9.1-201ENST00000619945 193 ntBASIC5.01□□□□□ -1.61
TOP2AP11388 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TOP2AP11388 MTCO1P7-201ENST00000419523 1542 ntBASIC5□□□□□ -1.61
TOP2AP11388 MAPK10-362ENST00000641864 4484 ntBASIC5□□□□□ -1.61
TOP2AP11388 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TOP2AP11388 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC5□□□□□ -1.61
TOP2AP11388 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TOP2AP11388 TXNP1-201ENST00000441872 371 ntBASIC5□□□□□ -1.61
TOP2AP11388 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5□□□□□ -1.61
TOP2AP11388 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5□□□□□ -1.61
TOP2AP11388 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5□□□□□ -1.61
TOP2AP11388 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5□□□□□ -1.61
TOP2AP11388 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5□□□□□ -1.61
TOP2AP11388 AC106734.1-201ENST00000568646 663 ntBASIC5□□□□□ -1.61
TOP2AP11388 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5□□□□□ -1.61
TOP2AP11388 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC5□□□□□ -1.61
TOP2AP11388 AC124856.1-201ENST00000600819 896 ntBASIC5□□□□□ -1.61
TOP2AP11388 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TOP2AP11388 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
TOP2AP11388 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TOP2AP11388 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TOP2AP11388 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.99□□□□□ -1.61
TOP2AP11388 SKINT1L-201ENST00000401057 817 ntBASIC4.99□□□□□ -1.61
TOP2AP11388 GTF2IP23-201ENST00000423746 351 ntBASIC4.99□□□□□ -1.61
TOP2AP11388 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TOP2AP11388 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.99□□□□□ -1.61
TOP2AP11388 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.99□□□□□ -1.61
TOP2AP11388 HSPE1P6-201ENST00000479457 291 ntBASIC4.99□□□□□ -1.61
TOP2AP11388 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms