Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AP000907.1-201ENST00000428428 510 ntBASIC4.09□□□□□ -1.75
TOP1P11387 RPL21P110-201ENST00000433345 446 ntBASIC4.09□□□□□ -1.75
TOP1P11387 AC074367.1-201ENST00000438685 1125 ntBASIC4.09□□□□□ -1.75
TOP1P11387 RPS7P5-201ENST00000441482 581 ntBASIC4.09□□□□□ -1.75
TOP1P11387 AC004801.2-202ENST00000463559 283 ntBASIC4.09□□□□□ -1.75
TOP1P11387 TRAV31-201ENST00000502780 342 ntBASIC4.09□□□□□ -1.75
TOP1P11387 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.09□□□□□ -1.75
TOP1P11387 RNU2-27P-201ENST00000516185 142 ntBASIC4.09□□□□□ -1.75
TOP1P11387 SNORA48.9-201ENST00000516419 162 ntBASIC4.09□□□□□ -1.75
TOP1P11387 RNU6-1231P-201ENST00000517185 103 ntBASIC4.09□□□□□ -1.75
TOP1P11387 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP1P11387 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP1P11387 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP1P11387 MIR4425-201ENST00000580572 84 ntBASIC4.09□□□□□ -1.75
TOP1P11387 AC018754.1-201ENST00000607486 925 ntBASIC4.09□□□□□ -1.75
TOP1P11387 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TOP1P11387 MIR4278-201ENST00000636094 69 ntBASIC4.09□□□□□ -1.75
TOP1P11387 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.09□□□□□ -1.76
TOP1P11387 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
TOP1P11387 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TOP1P11387 TNPO1P3-201ENST00000436471 2662 ntBASIC4.08□□□□□ -1.76
TOP1P11387 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TOP1P11387 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TOP1P11387 RNU2-6P-201ENST00000411404 190 ntBASIC4.08□□□□□ -1.76
TOP1P11387 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.08□□□□□ -1.76
TOP1P11387 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP1P11387 MRPS33P4-201ENST00000434892 317 ntBASIC4.08□□□□□ -1.76
TOP1P11387 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP1P11387 RSL24D1P2-201ENST00000445584 366 ntBASIC4.08□□□□□ -1.76
TOP1P11387 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TOP1P11387 PRSS3P4-201ENST00000453323 162 ntBASIC4.08□□□□□ -1.76
TOP1P11387 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.08□□□□□ -1.76
TOP1P11387 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP1P11387 RPL7P49-201ENST00000471402 708 ntBASIC4.08□□□□□ -1.76
TOP1P11387 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.08□□□□□ -1.76
TOP1P11387 SETP14-201ENST00000497538 873 ntBASIC4.08□□□□□ -1.76
TOP1P11387 AC078918.1-201ENST00000498515 228 ntBASIC4.08□□□□□ -1.76
TOP1P11387 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.08□□□□□ -1.76
TOP1P11387 PCBP2P3-201ENST00000509726 843 ntBASIC4.08□□□□□ -1.76
TOP1P11387 RNU6-889P-201ENST00000517189 103 ntBASIC4.08□□□□□ -1.76
TOP1P11387 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP1P11387 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP1P11387 MIR5186-201ENST00000577504 120 ntBASIC4.08□□□□□ -1.76
TOP1P11387 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP1P11387 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP1P11387 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.08□□□□□ -1.76
TOP1P11387 AL355365.1-201ENST00000616480 294 ntBASIC4.08□□□□□ -1.76
TOP1P11387 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.08□□□□□ -1.76
TOP1P11387 FAM157B-203ENST00000639350 358 ntBASIC4.08□□□□□ -1.76
TOP1P11387 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
TOP1P11387 OTUD4P1-201ENST00000237841 3067 ntBASIC4.08□□□□□ -1.76
TOP1P11387 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TOP1P11387 AC119744.1-201ENST00000454746 1715 ntBASIC4.07□□□□□ -1.76
TOP1P11387 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TOP1P11387 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TOP1P11387 AL136116.1-201ENST00000403591 381 ntBASIC4.07□□□□□ -1.76
TOP1P11387 RN7SKP111-201ENST00000410349 271 ntBASIC4.07□□□□□ -1.76
TOP1P11387 RANP4-201ENST00000413361 655 ntBASIC4.07□□□□□ -1.76
TOP1P11387 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP1P11387 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.07□□□□□ -1.76
TOP1P11387 AL159169.1-201ENST00000421119 127 ntBASIC4.07□□□□□ -1.76
TOP1P11387 AL445528.1-201ENST00000426330 420 ntBASIC4.07□□□□□ -1.76
TOP1P11387 AC097713.2-201ENST00000430199 356 ntBASIC4.07□□□□□ -1.76
TOP1P11387 RPL26P28-201ENST00000451325 435 ntBASIC4.07□□□□□ -1.76
TOP1P11387 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP1P11387 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.07□□□□□ -1.76
TOP1P11387 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.07□□□□□ -1.76
TOP1P11387 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.07□□□□□ -1.76
TOP1P11387 ARL2BPP6-201ENST00000512757 439 ntBASIC4.07□□□□□ -1.76
TOP1P11387 AC093755.1-201ENST00000512950 1023 ntBASIC4.07□□□□□ -1.76
TOP1P11387 AC008562.1-201ENST00000521763 330 ntBASIC4.07□□□□□ -1.76
TOP1P11387 AP006245.1-201ENST00000522549 120 ntBASIC4.07□□□□□ -1.76
TOP1P11387 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TOP1P11387 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP1P11387 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP1P11387 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP1P11387 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.07□□□□□ -1.76
TOP1P11387 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP1P11387 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.07□□□□□ -1.76
TOP1P11387 AC010928.3-201ENST00000587712 541 ntBASIC4.07□□□□□ -1.76
TOP1P11387 ELOCP35-201ENST00000604289 336 ntBASIC4.07□□□□□ -1.76
TOP1P11387 SUMO2P14-201ENST00000604488 293 ntBASIC4.07□□□□□ -1.76
TOP1P11387 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.07□□□□□ -1.76
TOP1P11387 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
TOP1P11387 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TOP1P11387 PWAR6-201ENST00000552334 4618 ntBASIC4.06□□□□□ -1.76
TOP1P11387 AL353746.1-201ENST00000566293 6881 ntBASIC4.06□□□□□ -1.76
TOP1P11387 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TOP1P11387 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TOP1P11387 MIR208A-201ENST00000362287 71 ntBASIC4.06□□□□□ -1.76
TOP1P11387 SNORD46.1-201ENST00000364139 104 ntBASIC4.06□□□□□ -1.76
TOP1P11387 RNU1-33P-201ENST00000364249 162 ntBASIC4.06□□□□□ -1.76
TOP1P11387 RNA5SP189-201ENST00000364920 115 ntBASIC4.06□□□□□ -1.76
TOP1P11387 MIR34B-201ENST00000385076 84 ntBASIC4.06□□□□□ -1.76
TOP1P11387 HMGB1P10-201ENST00000395823 563 ntBASIC4.06□□□□□ -1.76
TOP1P11387 HSPE1P26-201ENST00000405341 275 ntBASIC4.06□□□□□ -1.76
TOP1P11387 RN7SKP285-201ENST00000410137 318 ntBASIC4.06□□□□□ -1.76
TOP1P11387 RNU2-21P-201ENST00000410368 188 ntBASIC4.06□□□□□ -1.76
TOP1P11387 AC010385.1-201ENST00000412374 256 ntBASIC4.06□□□□□ -1.76
TOP1P11387 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms