Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC067852.4-201ENST00000590314 478 ntBASIC3.5□□□□□ -1.85
HOXC4P09017 BNIP3P27-201ENST00000599991 412 ntBASIC3.5□□□□□ -1.85
HOXC4P09017 AC083899.3-201ENST00000603413 594 ntBASIC3.5□□□□□ -1.85
HOXC4P09017 AL671309.1-201ENST00000603750 544 ntBASIC3.5□□□□□ -1.85
HOXC4P09017 AC242628.1-201ENST00000606810 391 ntBASIC3.5□□□□□ -1.85
HOXC4P09017 AC012531.5-201ENST00000611375 151 ntBASIC3.5□□□□□ -1.85
HOXC4P09017 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
HOXC4P09017 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC4P09017 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC4P09017 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC4P09017 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC4P09017 MTCO1P12-201ENST00000414273 1543 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HOXC4P09017 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC4P09017 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC4P09017 MTND4P31-201ENST00000425607 1343 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC4P09017 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
HOXC4P09017 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC4P09017 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HOXC4P09017 RNA5SP42-201ENST00000364278 115 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 SNORA27.3-201ENST00000364937 134 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 PTMAP5-201ENST00000393073 333 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC4P09017 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC4P09017 MTND4LP14-201ENST00000429447 288 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 MOB1AP1-201ENST00000430903 535 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 MRPS18BP2-201ENST00000434310 759 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC4P09017 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC4P09017 RN7SL93P-201ENST00000463035 293 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 AC092902.1-201ENST00000486999 259 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC4P09017 RPL30P11-201ENST00000495304 339 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 HMGB1P21-201ENST00000502313 581 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC4P09017 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC4P09017 SNORA70.18-201ENST00000516696 98 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC4P09017 AP003102.1-201ENST00000525638 661 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
HOXC4P09017 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.49□□□□□ -1.85
HOXC4P09017 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC4P09017 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.49□□□□□ -1.85
HOXC4P09017 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC4P09017 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
HOXC4P09017 AC005412.1-201ENST00000580812 1049 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.49□□□□□ -1.85
HOXC4P09017 DNAJC19P3-201ENST00000594491 331 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 ZNF92P3-201ENST00000596594 954 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 ELOCP35-201ENST00000604289 336 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 AL355365.1-201ENST00000616480 294 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 AC097372.4-201ENST00000625025 466 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC4P09017 NCAPGP1-201ENST00000505112 1814 ntBASIC3.49□□□□□ -1.85
HOXC4P09017 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC4P09017 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC4P09017 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC4P09017 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC4P09017 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXC4P09017 RNU1-33P-201ENST00000364249 162 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC4P09017 RSL24D1P1-201ENST00000404972 493 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 RN7SKP53-201ENST00000411337 315 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC4P09017 BX842559.1-201ENST00000419615 532 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 OSTCP5-201ENST00000425293 453 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 AC073508.1-201ENST00000428866 656 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 AC097713.2-201ENST00000430199 356 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 AL035458.1-201ENST00000433096 585 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXC4P09017 PRSS3P4-201ENST00000453323 162 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 CEACAMP4-201ENST00000457676 421 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXC4P09017 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXC4P09017 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.48□□□□□ -1.85
HOXC4P09017 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXC4P09017 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC4P09017 OR5H4P-201ENST00000510851 923 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC4P09017 RNU2-27P-201ENST00000516185 142 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 RN7SKP83-201ENST00000516512 178 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXC4P09017 AC007458.1-201ENST00000542812 373 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC4P09017 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC4P09017 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC4P09017 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC4P09017 AC010680.4-201ENST00000605334 543 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 AL450270.1-201ENST00000606160 391 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 AL391834.2-201ENST00000609982 546 ntBASIC3.48□□□□□ -1.85
HOXC4P09017 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXC4P09017 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC4P09017 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC4P09017 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
HOXC4P09017 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC4P09017 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
HOXC4P09017 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms