Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 DUXAP1-201ENST00000556632 463 ntBASIC4.51□□□□□ -1.69
MMP3P08254 SULT1C2P2-201ENST00000562517 294 ntBASIC4.51□□□□□ -1.69
MMP3P08254 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.51□□□□□ -1.69
MMP3P08254 MIR3944-201ENST00000581277 108 ntBASIC4.51□□□□□ -1.69
MMP3P08254 SLC25A36P1-201ENST00000590111 465 ntBASIC4.51□□□□□ -1.69
MMP3P08254 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.51□□□□□ -1.69
MMP3P08254 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MMP3P08254 AL031281.1-201ENST00000604049 488 ntBASIC4.51□□□□□ -1.69
MMP3P08254 AL390816.3-201ENST00000604527 1066 ntBASIC4.51□□□□□ -1.69
MMP3P08254 AL139418.1-201ENST00000613613 177 ntBASIC4.51□□□□□ -1.69
MMP3P08254 AL121772.2-201ENST00000614331 297 ntBASIC4.51□□□□□ -1.69
MMP3P08254 AC090246.1-201ENST00000616499 426 ntBASIC4.51□□□□□ -1.69
MMP3P08254 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MMP3P08254 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.51□□□□□ -1.69
MMP3P08254 FP236240.3-201ENST00000623061 327 ntBASIC4.51□□□□□ -1.69
MMP3P08254 MIR3974-201ENST00000637126 96 ntBASIC4.51□□□□□ -1.69
MMP3P08254 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
MMP3P08254 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MMP3P08254 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
MMP3P08254 AC025263.3-201ENST00000622965 1396 ntBASIC4.51□□□□□ -1.69
MMP3P08254 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MMP3P08254 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MMP3P08254 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.5□□□□□ -1.69
MMP3P08254 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MMP3P08254 AL161912.2-201ENST00000565707 3007 ntBASIC4.5□□□□□ -1.69
MMP3P08254 AC067945.1-201ENST00000342609 618 ntBASIC4.5□□□□□ -1.69
MMP3P08254 MIR208A-201ENST00000362287 71 ntBASIC4.5□□□□□ -1.69
MMP3P08254 SNORD35B-201ENST00000363660 87 ntBASIC4.5□□□□□ -1.69
MMP3P08254 RNU6-178P-201ENST00000384631 104 ntBASIC4.5□□□□□ -1.69
MMP3P08254 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
MMP3P08254 AL356131.1-201ENST00000405826 414 ntBASIC4.5□□□□□ -1.69
MMP3P08254 RNA5SP80-201ENST00000410475 111 ntBASIC4.5□□□□□ -1.69
MMP3P08254 RPS23P10-201ENST00000416185 486 ntBASIC4.5□□□□□ -1.69
MMP3P08254 AL590609.2-201ENST00000421430 368 ntBASIC4.5□□□□□ -1.69
MMP3P08254 DPRXP1-201ENST00000426312 460 ntBASIC4.5□□□□□ -1.69
MMP3P08254 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.5□□□□□ -1.69
MMP3P08254 PRELID3BP10-201ENST00000431957 584 ntBASIC4.5□□□□□ -1.69
MMP3P08254 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
MMP3P08254 SEPT7P5-201ENST00000434048 306 ntBASIC4.5□□□□□ -1.69
MMP3P08254 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.5□□□□□ -1.69
MMP3P08254 NOTCH2P1-201ENST00000443481 624 ntBASIC4.5□□□□□ -1.69
MMP3P08254 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MMP3P08254 RNU7-125P-201ENST00000458760 62 ntBASIC4.5□□□□□ -1.69
MMP3P08254 UBA52P3-201ENST00000491303 382 ntBASIC4.5□□□□□ -1.69
MMP3P08254 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.5□□□□□ -1.69
MMP3P08254 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.5□□□□□ -1.69
MMP3P08254 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.5□□□□□ -1.69
MMP3P08254 AC091516.1-201ENST00000549191 703 ntBASIC4.5□□□□□ -1.69
MMP3P08254 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.5□□□□□ -1.69
MMP3P08254 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.5□□□□□ -1.69
MMP3P08254 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.5□□□□□ -1.69
MMP3P08254 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.5□□□□□ -1.69
MMP3P08254 AC040904.1-201ENST00000590850 223 ntBASIC4.5□□□□□ -1.69
MMP3P08254 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.5□□□□□ -1.69
MMP3P08254 Z99497.2-201ENST00000603634 310 ntBASIC4.5□□□□□ -1.69
MMP3P08254 AL022161.1-201ENST00000604390 213 ntBASIC4.5□□□□□ -1.69
MMP3P08254 DPRXP5-201ENST00000604662 539 ntBASIC4.5□□□□□ -1.69
MMP3P08254 AL451044.1-201ENST00000604867 238 ntBASIC4.5□□□□□ -1.69
MMP3P08254 AC018638.7-201ENST00000605836 1114 ntBASIC4.5□□□□□ -1.69
MMP3P08254 AC131235.4-201ENST00000609288 620 ntBASIC4.5□□□□□ -1.69
MMP3P08254 AC064801.1-201ENST00000612025 407 ntBASIC4.5□□□□□ -1.69
MMP3P08254 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.5□□□□□ -1.69
MMP3P08254 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
MMP3P08254 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MMP3P08254 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MMP3P08254 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MMP3P08254 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MMP3P08254 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MMP3P08254 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
MMP3P08254 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.49□□□□□ -1.69
MMP3P08254 AP001642.1-201ENST00000624727 2117 ntBASIC4.49□□□□□ -1.69
MMP3P08254 AC109315.1-201ENST00000584143 1347 ntBASIC4.49□□□□□ -1.69
MMP3P08254 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MMP3P08254 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MMP3P08254 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
MMP3P08254 HMGB1P5-201ENST00000255320 642 ntBASIC4.49□□□□□ -1.69
MMP3P08254 RNU1-15P-201ENST00000353977 144 ntBASIC4.49□□□□□ -1.69
MMP3P08254 SNORD46.1-201ENST00000364139 104 ntBASIC4.49□□□□□ -1.69
MMP3P08254 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.49□□□□□ -1.69
MMP3P08254 RNU6-761P-201ENST00000384148 107 ntBASIC4.49□□□□□ -1.69
MMP3P08254 MIR92A2-201ENST00000385299 75 ntBASIC4.49□□□□□ -1.69
MMP3P08254 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
MMP3P08254 AL359643.1-201ENST00000404109 423 ntBASIC4.49□□□□□ -1.69
MMP3P08254 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.49□□□□□ -1.69
MMP3P08254 AC234782.4-201ENST00000417646 1048 ntBASIC4.49□□□□□ -1.69
MMP3P08254 USP9YP11-201ENST00000427537 717 ntBASIC4.49□□□□□ -1.69
MMP3P08254 RPL37P1-201ENST00000432310 284 ntBASIC4.49□□□□□ -1.69
MMP3P08254 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.49□□□□□ -1.69
MMP3P08254 ATP5F1P1-201ENST00000433775 569 ntBASIC4.49□□□□□ -1.69
MMP3P08254 MTND3P1-201ENST00000441336 220 ntBASIC4.49□□□□□ -1.69
MMP3P08254 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.49□□□□□ -1.69
MMP3P08254 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.49□□□□□ -1.69
MMP3P08254 AC243772.1-201ENST00000451620 410 ntBASIC4.49□□□□□ -1.69
MMP3P08254 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.49□□□□□ -1.69
MMP3P08254 RPL21P134-201ENST00000453468 483 ntBASIC4.49□□□□□ -1.69
MMP3P08254 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.49□□□□□ -1.69
MMP3P08254 RAD23BP3-201ENST00000454157 1152 ntBASIC4.49□□□□□ -1.69
MMP3P08254 RNA5SP103-201ENST00000459503 118 ntBASIC4.49□□□□□ -1.69
MMP3P08254 AC108734.3-201ENST00000481241 1165 ntBASIC4.49□□□□□ -1.69
MMP3P08254 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms