Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC090337.1-201ENST00000579651 2074 ntBASIC3.68□□□□□ -1.82
RETP07949 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.68□□□□□ -1.82
RETP07949 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RETP07949 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RETP07949 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RETP07949 SNORD9-201ENST00000362566 104 ntBASIC3.68□□□□□ -1.82
RETP07949 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RETP07949 RNU6-31P-201ENST00000384388 108 ntBASIC3.68□□□□□ -1.82
RETP07949 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RETP07949 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RETP07949 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
RETP07949 UBA52P6-201ENST00000399822 382 ntBASIC3.68□□□□□ -1.82
RETP07949 HSPE1P8-201ENST00000406997 288 ntBASIC3.68□□□□□ -1.82
RETP07949 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.68□□□□□ -1.82
RETP07949 UBE2V1P1-201ENST00000430836 445 ntBASIC3.68□□□□□ -1.82
RETP07949 MTCO1P57-201ENST00000432182 261 ntBASIC3.68□□□□□ -1.82
RETP07949 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.68□□□□□ -1.82
RETP07949 SETP5-201ENST00000437270 562 ntBASIC3.68□□□□□ -1.82
RETP07949 SKP1P1-201ENST00000438081 489 ntBASIC3.68□□□□□ -1.82
RETP07949 RPS7P5-201ENST00000441482 581 ntBASIC3.68□□□□□ -1.82
RETP07949 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.68□□□□□ -1.82
RETP07949 MTND3P4-201ENST00000453537 303 ntBASIC3.68□□□□□ -1.82
RETP07949 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.68□□□□□ -1.82
RETP07949 RPS27AP1-201ENST00000475545 471 ntBASIC3.68□□□□□ -1.82
RETP07949 AC073522.1-201ENST00000483312 377 ntBASIC3.68□□□□□ -1.82
RETP07949 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.68□□□□□ -1.82
RETP07949 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.68□□□□□ -1.82
RETP07949 AL035404.1-201ENST00000497982 568 ntBASIC3.68□□□□□ -1.82
RETP07949 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.68□□□□□ -1.82
RETP07949 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.68□□□□□ -1.82
RETP07949 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.68□□□□□ -1.82
RETP07949 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.68□□□□□ -1.82
RETP07949 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.68□□□□□ -1.82
RETP07949 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.68□□□□□ -1.82
RETP07949 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
RETP07949 AC006116.10-201ENST00000591836 581 ntBASIC3.68□□□□□ -1.82
RETP07949 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.68□□□□□ -1.82
RETP07949 BRDTP1-201ENST00000605735 677 ntBASIC3.68□□□□□ -1.82
RETP07949 AC091905.1-201ENST00000624400 311 ntBASIC3.68□□□□□ -1.82
RETP07949 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RETP07949 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RETP07949 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
RETP07949 CR381670.1-201ENST00000624291 1693 ntBASIC3.68□□□□□ -1.82
RETP07949 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
RETP07949 AL035425.3-201ENST00000564206 4996 ntBASIC3.68□□□□□ -1.82
RETP07949 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.67□□□□□ -1.82
RETP07949 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RETP07949 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RETP07949 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RETP07949 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RETP07949 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RETP07949 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.67□□□□□ -1.82
RETP07949 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.67□□□□□ -1.82
RETP07949 AC005300.1-201ENST00000428401 373 ntBASIC3.67□□□□□ -1.82
RETP07949 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.67□□□□□ -1.82
RETP07949 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.67□□□□□ -1.82
RETP07949 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.67□□□□□ -1.82
RETP07949 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.67□□□□□ -1.82
RETP07949 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RETP07949 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.67□□□□□ -1.82
RETP07949 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.67□□□□□ -1.82
RETP07949 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.67□□□□□ -1.82
RETP07949 RN7SKP83-201ENST00000516512 178 ntBASIC3.67□□□□□ -1.82
RETP07949 RN7SKP209-201ENST00000516888 304 ntBASIC3.67□□□□□ -1.82
RETP07949 SUMO2P20-201ENST00000520803 283 ntBASIC3.67□□□□□ -1.82
RETP07949 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.67□□□□□ -1.82
RETP07949 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.67□□□□□ -1.82
RETP07949 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.67□□□□□ -1.82
RETP07949 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.67□□□□□ -1.82
RETP07949 AC245128.3-201ENST00000594721 748 ntBASIC3.67□□□□□ -1.82
RETP07949 AC006077.1-201ENST00000604746 343 ntBASIC3.67□□□□□ -1.82
RETP07949 AP004372.1-201ENST00000604842 844 ntBASIC3.67□□□□□ -1.82
RETP07949 uc_338.9-201ENST00000617424 182 ntBASIC3.67□□□□□ -1.82
RETP07949 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.67□□□□□ -1.82
RETP07949 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RETP07949 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.67□□□□□ -1.82
RETP07949 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.67□□□□□ -1.82
RETP07949 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.67□□□□□ -1.82
RETP07949 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RETP07949 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RETP07949 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
RETP07949 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RETP07949 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RETP07949 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.66□□□□□ -1.82
RETP07949 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.66□□□□□ -1.82
RETP07949 HSPE1P26-201ENST00000405341 275 ntBASIC3.66□□□□□ -1.82
RETP07949 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.66□□□□□ -1.82
RETP07949 AL024507.1-201ENST00000412741 274 ntBASIC3.66□□□□□ -1.82
RETP07949 RPF2P1-201ENST00000424137 906 ntBASIC3.66□□□□□ -1.82
RETP07949 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.66□□□□□ -1.82
RETP07949 AC108941.1-201ENST00000502853 530 ntBASIC3.66□□□□□ -1.82
RETP07949 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.66□□□□□ -1.82
RETP07949 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.66□□□□□ -1.82
RETP07949 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.66□□□□□ -1.82
RETP07949 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.66□□□□□ -1.82
RETP07949 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.66□□□□□ -1.82
RETP07949 AC099489.2-201ENST00000574976 260 ntBASIC3.66□□□□□ -1.82
RETP07949 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.66□□□□□ -1.82
RETP07949 AC022884.3-201ENST00000579571 248 ntBASIC3.66□□□□□ -1.82
RETP07949 MIR4325-201ENST00000583049 90 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms