Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
APOEP02649 RPL21P110-201ENST00000433345 446 ntBASIC3.52□□□□□ -1.85
APOEP02649 NEK4P1-201ENST00000433383 879 ntBASIC3.52□□□□□ -1.85
APOEP02649 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.52□□□□□ -1.85
APOEP02649 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.52□□□□□ -1.85
APOEP02649 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.52□□□□□ -1.85
APOEP02649 AC008264.1-201ENST00000447612 367 ntBASIC3.52□□□□□ -1.85
APOEP02649 RPL31P53-201ENST00000457065 348 ntBASIC3.52□□□□□ -1.85
APOEP02649 RNU7-27P-201ENST00000459281 62 ntBASIC3.52□□□□□ -1.85
APOEP02649 AC093663.1-201ENST00000497190 394 ntBASIC3.52□□□□□ -1.85
APOEP02649 AC021146.5-201ENST00000503544 545 ntBASIC3.52□□□□□ -1.85
APOEP02649 OR5H4P-201ENST00000510851 923 ntBASIC3.52□□□□□ -1.85
APOEP02649 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.52□□□□□ -1.85
APOEP02649 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.52□□□□□ -1.85
APOEP02649 MIR4276-201ENST00000584832 70 ntBASIC3.52□□□□□ -1.85
APOEP02649 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.52□□□□□ -1.85
APOEP02649 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.52□□□□□ -1.85
APOEP02649 AC004777.1-201ENST00000624317 287 ntBASIC3.52□□□□□ -1.85
APOEP02649 AC048347.1-201ENST00000624621 427 ntBASIC3.52□□□□□ -1.85
APOEP02649 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.52□□□□□ -1.85
APOEP02649 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.52□□□□□ -1.85
APOEP02649 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
APOEP02649 MTND5P27-201ENST00000428871 1720 ntBASIC3.52□□□□□ -1.85
APOEP02649 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.52□□□□□ -1.85
APOEP02649 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.52□□□□□ -1.85
APOEP02649 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOEP02649 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
APOEP02649 DCAF13P3-201ENST00000561147 1334 ntBASIC3.51□□□□□ -1.85
APOEP02649 HSPE1P26-201ENST00000405341 275 ntBASIC3.51□□□□□ -1.85
APOEP02649 RNA5SP31-201ENST00000411144 127 ntBASIC3.51□□□□□ -1.85
APOEP02649 BX323014.1-201ENST00000412876 237 ntBASIC3.51□□□□□ -1.85
APOEP02649 AC126124.2-201ENST00000413542 321 ntBASIC3.51□□□□□ -1.85
APOEP02649 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.51□□□□□ -1.85
APOEP02649 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.51□□□□□ -1.85
APOEP02649 RPL23AP82-202ENST00000427528 469 ntBASIC3.51□□□□□ -1.85
APOEP02649 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.51□□□□□ -1.85
APOEP02649 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.51□□□□□ -1.85
APOEP02649 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.51□□□□□ -1.85
APOEP02649 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.51□□□□□ -1.85
APOEP02649 HMGB3P30-201ENST00000457863 606 ntBASIC3.51□□□□□ -1.85
APOEP02649 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.51□□□□□ -1.85
APOEP02649 CENPBD1P1-201ENST00000464061 469 ntBASIC3.51□□□□□ -1.85
APOEP02649 AC008155.2-201ENST00000464337 397 ntBASIC3.51□□□□□ -1.85
APOEP02649 RPL6P9-201ENST00000466502 859 ntBASIC3.51□□□□□ -1.85
APOEP02649 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.51□□□□□ -1.85
APOEP02649 MTATP6P22-201ENST00000507369 598 ntBASIC3.51□□□□□ -1.85
APOEP02649 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.51□□□□□ -1.85
APOEP02649 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.51□□□□□ -1.85
APOEP02649 AC074050.1-201ENST00000563247 211 ntBASIC3.51□□□□□ -1.85
APOEP02649 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.51□□□□□ -1.85
APOEP02649 NF1P5-201ENST00000588287 448 ntBASIC3.51□□□□□ -1.85
APOEP02649 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.51□□□□□ -1.85
APOEP02649 AC067852.3-201ENST00000589177 561 ntBASIC3.51□□□□□ -1.85
APOEP02649 FAM60CP-201ENST00000591086 664 ntBASIC3.51□□□□□ -1.85
APOEP02649 MTCO2P22-201ENST00000603246 681 ntBASIC3.51□□□□□ -1.85
APOEP02649 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.51□□□□□ -1.85
APOEP02649 RPL23AP61-201ENST00000623642 466 ntBASIC3.51□□□□□ -1.85
APOEP02649 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.5□□□□□ -1.85
APOEP02649 AC017071.1-201ENST00000564407 2204 ntBASIC3.5□□□□□ -1.85
APOEP02649 AL118496.1-201ENST00000440201 1812 ntBASIC3.5□□□□□ -1.85
APOEP02649 RNU1-75P-201ENST00000347264 129 ntBASIC3.5□□□□□ -1.85
APOEP02649 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
APOEP02649 MIR34B-201ENST00000385076 84 ntBASIC3.5□□□□□ -1.85
APOEP02649 GLRXP1-201ENST00000423261 334 ntBASIC3.5□□□□□ -1.85
APOEP02649 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.5□□□□□ -1.85
APOEP02649 TRIAP1P1-201ENST00000427062 225 ntBASIC3.5□□□□□ -1.85
APOEP02649 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.5□□□□□ -1.85
APOEP02649 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.5□□□□□ -1.85
APOEP02649 RPS4XP22-201ENST00000480755 780 ntBASIC3.5□□□□□ -1.85
APOEP02649 RPL32P34-201ENST00000486380 400 ntBASIC3.5□□□□□ -1.85
APOEP02649 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.5□□□□□ -1.85
APOEP02649 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.5□□□□□ -1.85
APOEP02649 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.5□□□□□ -1.85
APOEP02649 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.5□□□□□ -1.85
APOEP02649 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.5□□□□□ -1.85
APOEP02649 SRGNP1-201ENST00000603392 451 ntBASIC3.5□□□□□ -1.85
APOEP02649 AL365400.2-201ENST00000605604 902 ntBASIC3.5□□□□□ -1.85
APOEP02649 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.5□□□□□ -1.85
APOEP02649 AC127502.3-201ENST00000636170 1206 ntBASIC3.5□□□□□ -1.85
APOEP02649 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOEP02649 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.5□□□□□ -1.85
APOEP02649 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.5□□□□□ -1.85
APOEP02649 Z83843.1-201ENST00000604070 3685 ntBASIC3.5□□□□□ -1.85
APOEP02649 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOEP02649 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOEP02649 AC096656.1-201ENST00000623826 1364 ntBASIC3.5□□□□□ -1.85
APOEP02649 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
APOEP02649 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOEP02649 AL356274.2-201ENST00000624379 3752 ntBASIC3.49□□□□□ -1.85
APOEP02649 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
APOEP02649 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOEP02649 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOEP02649 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOEP02649 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
APOEP02649 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
APOEP02649 SNORD46.1-201ENST00000364139 104 ntBASIC3.49□□□□□ -1.85
APOEP02649 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOEP02649 OR6K3-202ENST00000368146 996 ntBASIC3.49□□□□□ -1.85
APOEP02649 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.49□□□□□ -1.85
APOEP02649 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms