Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC025554.1-201ENST00000505641 188 ntBASIC3.96□□□□□ -1.78
SSX4O60224 AC109445.1-201ENST00000512356 383 ntBASIC3.96□□□□□ -1.78
SSX4O60224 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX4O60224 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.96□□□□□ -1.78
SSX4O60224 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX4O60224 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX4O60224 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX4O60224 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.96□□□□□ -1.78
SSX4O60224 AL389895.1-201ENST00000554127 252 ntBASIC3.96□□□□□ -1.78
SSX4O60224 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX4O60224 OR4K7P-201ENST00000580232 945 ntBASIC3.96□□□□□ -1.78
SSX4O60224 AC023575.1-201ENST00000580510 358 ntBASIC3.96□□□□□ -1.78
SSX4O60224 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.96□□□□□ -1.78
SSX4O60224 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SSX4O60224 AC090181.2-201ENST00000602975 672 ntBASIC3.96□□□□□ -1.78
SSX4O60224 AC103792.1-201ENST00000603591 919 ntBASIC3.96□□□□□ -1.78
SSX4O60224 AC010680.3-201ENST00000604215 520 ntBASIC3.96□□□□□ -1.78
SSX4O60224 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.96□□□□□ -1.78
SSX4O60224 AC010680.4-201ENST00000605334 543 ntBASIC3.96□□□□□ -1.78
SSX4O60224 Z99289.3-201ENST00000605586 594 ntBASIC3.96□□□□□ -1.78
SSX4O60224 AP001521.1-201ENST00000609150 300 ntBASIC3.96□□□□□ -1.78
SSX4O60224 TUSC7.1-201ENST00000610969 165 ntBASIC3.96□□□□□ -1.78
SSX4O60224 AC005962.2-201ENST00000611427 652 ntBASIC3.96□□□□□ -1.78
SSX4O60224 AC004825.2-201ENST00000616634 455 ntBASIC3.96□□□□□ -1.78
SSX4O60224 AC121761.2-201ENST00000617300 689 ntBASIC3.96□□□□□ -1.78
SSX4O60224 MIR4727-201ENST00000622232 55 ntBASIC3.96□□□□□ -1.78
SSX4O60224 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.96□□□□□ -1.78
SSX4O60224 U3.53-201ENST00000628922 216 ntBASIC3.96□□□□□ -1.78
SSX4O60224 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSX4O60224 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSX4O60224 CDR1-202ENST00000625883 1485 ntBASIC3.96□□□□□ -1.78
SSX4O60224 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.96□□□□□ -1.78
SSX4O60224 OR56B2P-202ENST00000641377 2453 ntBASIC3.96□□□□□ -1.78
SSX4O60224 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SSX4O60224 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSX4O60224 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSX4O60224 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SSX4O60224 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SSX4O60224 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSX4O60224 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSX4O60224 AL133412.1-201ENST00000380194 2992 ntBASIC3.95□□□□□ -1.78
SSX4O60224 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSX4O60224 AP000776.1-201ENST00000530032 1663 ntBASIC3.95□□□□□ -1.78
SSX4O60224 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX4O60224 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX4O60224 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSX4O60224 RNU6-216P-201ENST00000363282 104 ntBASIC3.95□□□□□ -1.78
SSX4O60224 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSX4O60224 AL590762.2-201ENST00000395798 571 ntBASIC3.95□□□□□ -1.78
SSX4O60224 TAF9BP1-201ENST00000396646 746 ntBASIC3.95□□□□□ -1.78
SSX4O60224 MTND4P13-201ENST00000402078 1023 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AL023807.1-201ENST00000407932 359 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AL450338.1-201ENST00000407987 512 ntBASIC3.95□□□□□ -1.78
SSX4O60224 SNORA11-201ENST00000408789 128 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.95□□□□□ -1.78
SSX4O60224 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AL391219.1-201ENST00000422570 483 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX4O60224 AL139421.1-201ENST00000423010 169 ntBASIC3.95□□□□□ -1.78
SSX4O60224 HIGD1AP4-201ENST00000430194 280 ntBASIC3.95□□□□□ -1.78
SSX4O60224 PRELID3BP10-201ENST00000431957 584 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX4O60224 CBX1P1-201ENST00000440184 427 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX4O60224 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.95□□□□□ -1.78
SSX4O60224 MTND1P16-201ENST00000465177 898 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AC011276.1-201ENST00000469688 323 ntBASIC3.95□□□□□ -1.78
SSX4O60224 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX4O60224 RNF138P1-201ENST00000502765 546 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX4O60224 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX4O60224 IGLVIV-65-201ENST00000517313 360 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX4O60224 ZNF705CP-201ENST00000530515 889 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX4O60224 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX4O60224 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.95□□□□□ -1.78
SSX4O60224 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSX4O60224 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
SSX4O60224 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX4O60224 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.95□□□□□ -1.78
SSX4O60224 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX4O60224 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX4O60224 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX4O60224 AC084783.1-201ENST00000565846 910 ntBASIC3.95□□□□□ -1.78
SSX4O60224 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSX4O60224 AC009464.1-201ENST00000615731 469 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AC099669.2-201ENST00000616549 437 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AP000484.1-201ENST00000620067 1252 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AC120349.2-201ENST00000625002 298 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AC092184.1-201ENST00000625042 715 ntBASIC3.95□□□□□ -1.78
SSX4O60224 MIR4496-201ENST00000635896 61 ntBASIC3.95□□□□□ -1.78
SSX4O60224 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSX4O60224 FAM35DP-201ENST00000323387 2712 ntBASIC3.95□□□□□ -1.78
SSX4O60224 AC006971.1-201ENST00000407916 4486 ntBASIC3.95□□□□□ -1.78
SSX4O60224 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX4O60224 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX4O60224 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX4O60224 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSX4O60224 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms