Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RPS3P2-201ENST00000421346 701 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 RPL12P16-201ENST00000431098 498 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 AL353662.1-201ENST00000439099 327 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXA2O43364 AC016696.1-201ENST00000446949 318 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 AC002553.3-201ENST00000453002 341 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.8□□□□□ -1.32
HOXA2O43364 CLCA3P-203ENST00000490028 2781 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXA2O43364 AC008627.1-201ENST00000517511 1704 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXA2O43364 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
HOXA2O43364 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXA2O43364 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXA2O43364 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 AC020910.3-201ENST00000603701 874 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 ATP1B3P1-201ENST00000605365 821 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 AL512652.1-201ENST00000619006 500 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 MIR8062-201ENST00000621515 85 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 MFSD8-219ENST00000641228 2559 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXA2O43364 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
HOXA2O43364 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HOXA2O43364 AC009166.2-201ENST00000624410 2833 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
HOXA2O43364 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
HOXA2O43364 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXA2O43364 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXA2O43364 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXA2O43364 CYP2G2P-201ENST00000594920 1485 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 SAMMSON-210ENST00000641260 1308 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXA2O43364 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HOXA2O43364 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXA2O43364 SNORA21-201ENST00000362423 132 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 RNU6-266P-201ENST00000364225 107 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 RHOT1P2-201ENST00000366423 333 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 RNU6-128P-201ENST00000383976 107 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 MIR130B-202ENST00000385018 82 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 AC069218.2-201ENST00000411665 344 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXA2O43364 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXA2O43364 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXA2O43364 BX284632.2-201ENST00000421091 399 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 REREP1Y-201ENST00000422655 198 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 AC234779.1-201ENST00000425910 285 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 PPIAP10-201ENST00000438675 458 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 REREP2Y-201ENST00000439103 200 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.79□□□□□ -1.32
HOXA2O43364 AL359955.2-201ENST00000445380 353 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 PPIAP20-201ENST00000449839 135 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXA2O43364 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXA2O43364 AC103987.1-201ENST00000473394 348 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 RPL12P20-201ENST00000475538 479 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 AC068781.1-201ENST00000488231 618 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 AC104109.1-201ENST00000498563 436 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 SNORA58-201ENST00000505219 137 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 AC104057.1-201ENST00000515547 497 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 RNU6-789P-201ENST00000517105 102 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 AC018442.3-201ENST00000523025 183 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXA2O43364 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXA2O43364 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.79□□□□□ -1.32
HOXA2O43364 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.79□□□□□ -1.32
HOXA2O43364 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.79□□□□□ -1.32
HOXA2O43364 AC008521.2-201ENST00000591021 259 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXA2O43364 AC139493.1-201ENST00000604368 397 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 MIR8089-201ENST00000620165 82 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 AC129915.3-201ENST00000634128 948 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.79□□□□□ -1.32
HOXA2O43364 AC007114.2-201ENST00000576014 4281 ntBASIC6.79□□□□□ -1.32
HOXA2O43364 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXA2O43364 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HOXA2O43364 RAD17P2-201ENST00000451754 1977 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXA2O43364 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HOXA2O43364 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXA2O43364 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HOXA2O43364 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HOXA2O43364 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXA2O43364 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXA2O43364 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXA2O43364 AL034546.1-201ENST00000623740 3693 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 AC016745.2-201ENST00000608834 3443 ntBASIC6.78□□□□□ -1.32
HOXA2O43364 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HOXA2O43364 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
HOXA2O43364 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HOXA2O43364 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms