Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.92□□□□□ -1.46
SOX1O00570 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX1O00570 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX1O00570 RPS15AP9-201ENST00000439856 381 ntBASIC5.92□□□□□ -1.46
SOX1O00570 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.92□□□□□ -1.46
SOX1O00570 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 RPS20P32-201ENST00000456044 356 ntBASIC5.92□□□□□ -1.46
SOX1O00570 PABPC1P3-201ENST00000469174 459 ntBASIC5.92□□□□□ -1.46
SOX1O00570 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.92□□□□□ -1.46
SOX1O00570 AC110792.2-201ENST00000510278 224 ntBASIC5.92□□□□□ -1.46
SOX1O00570 BTF3P13-201ENST00000513224 490 ntBASIC5.92□□□□□ -1.46
SOX1O00570 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 BNIP3P6-201ENST00000549284 499 ntBASIC5.92□□□□□ -1.46
SOX1O00570 SCOCP1-201ENST00000554676 349 ntBASIC5.92□□□□□ -1.46
SOX1O00570 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX1O00570 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX1O00570 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX1O00570 AC136443.5-201ENST00000603741 370 ntBASIC5.92□□□□□ -1.46
SOX1O00570 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.92□□□□□ -1.46
SOX1O00570 AC008785.1-201ENST00000624475 456 ntBASIC5.92□□□□□ -1.46
SOX1O00570 AL078596.1-201ENST00000624856 447 ntBASIC5.92□□□□□ -1.46
SOX1O00570 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX1O00570 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX1O00570 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX1O00570 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX1O00570 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SOX1O00570 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX1O00570 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SOX1O00570 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX1O00570 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX1O00570 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX1O00570 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX1O00570 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX1O00570 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX1O00570 AC114546.3-201ENST00000623582 1734 ntBASIC5.91□□□□□ -1.46
SOX1O00570 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX1O00570 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX1O00570 DOCK11P1-201ENST00000553480 5932 ntBASIC5.91□□□□□ -1.46
SOX1O00570 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX1O00570 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX1O00570 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SOX1O00570 SNORA33.2-201ENST00000365413 134 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AL359837.1-201ENST00000381357 287 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AL078599.1-201ENST00000402075 293 ntBASIC5.91□□□□□ -1.46
SOX1O00570 MYL6P5-201ENST00000412707 459 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX1O00570 AC008280.1-201ENST00000418851 412 ntBASIC5.91□□□□□ -1.46
SOX1O00570 OR1AA1P-201ENST00000419597 916 ntBASIC5.91□□□□□ -1.46
SOX1O00570 MTCO2P27-201ENST00000420740 428 ntBASIC5.91□□□□□ -1.46
SOX1O00570 IPO7P1-201ENST00000442031 636 ntBASIC5.91□□□□□ -1.46
SOX1O00570 CACYBPP2-201ENST00000453625 678 ntBASIC5.91□□□□□ -1.46
SOX1O00570 MTCO3P2-201ENST00000457365 171 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AC078785.3-201ENST00000476607 425 ntBASIC5.91□□□□□ -1.46
SOX1O00570 RPL7AP10-201ENST00000481016 791 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AC233702.1-201ENST00000482905 502 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX1O00570 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX1O00570 RN7SKP256-201ENST00000517201 314 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AC073581.1-201ENST00000519036 575 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AC090572.1-201ENST00000519251 160 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX1O00570 AC022616.3-201ENST00000523940 148 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AC009643.1-201ENST00000532030 391 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AC007494.1-201ENST00000562293 760 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX1O00570 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX1O00570 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX1O00570 CYCSP1-201ENST00000604815 315 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AC021646.1-201ENST00000605469 484 ntBASIC5.91□□□□□ -1.46
SOX1O00570 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX1O00570 AC009318.4-201ENST00000620496 486 ntBASIC5.91□□□□□ -1.46
SOX1O00570 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX1O00570 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SOX1O00570 ZNF652P1-201ENST00000442420 1309 ntBASIC5.91□□□□□ -1.46
SOX1O00570 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX1O00570 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX1O00570 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX1O00570 MTND5P1-201ENST00000445440 1375 ntBASIC5.91□□□□□ -1.46
SOX1O00570 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SOX1O00570 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX1O00570 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
SOX1O00570 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX1O00570 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX1O00570 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SOX1O00570 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX1O00570 AC092125.1-201ENST00000562568 1995 ntBASIC5.9□□□□□ -1.46
SOX1O00570 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX1O00570 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.9□□□□□ -1.46
SOX1O00570 Y_RNA.459-201ENST00000384251 102 ntBASIC5.9□□□□□ -1.46
SOX1O00570 RNU6-729P-201ENST00000384399 107 ntBASIC5.9□□□□□ -1.46
SOX1O00570 MIR551A-201ENST00000385042 96 ntBASIC5.9□□□□□ -1.46
SOX1O00570 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.9□□□□□ -1.46
SOX1O00570 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX1O00570 AL591416.1-201ENST00000404015 867 ntBASIC5.9□□□□□ -1.46
SOX1O00570 RNU2-62P-201ENST00000410868 191 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms