Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC188H7C350 RNA5SP239-201ENST00000410218 129 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 RN7SKP177-201ENST00000410567 355 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 ELOCP19-201ENST00000411919 318 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 AL590139.1-201ENST00000416267 400 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AC009237.2-201ENST00000421358 284 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 MTCO3P1-205ENST00000422088 832 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 B3GNT2P1-201ENST00000434960 952 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 AL356276.2-201ENST00000435919 558 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 RANP8-201ENST00000444720 713 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC188H7C350 NANOGP10-201ENST00000453325 895 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 AP000926.1-201ENST00000479573 241 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 VPS26AP1-201ENST00000483197 979 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 TRBV12-2-201ENST00000489763 344 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC188H7C350 HPRT1P1-201ENST00000509498 657 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC188H7C350 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC188H7C350 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AC087369.1-201ENST00000520775 996 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 AC138701.1-201ENST00000524329 714 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 AP001189.2-201ENST00000527320 189 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC188H7C350 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC188H7C350 PSMB7P1-201ENST00000556349 514 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC188H7C350 MIR6868-201ENST00000611215 58 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC188H7C350 AC010608.3-201ENST00000625048 527 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC188H7C350 MTND5P3-201ENST00000438536 1800 ntBASIC4.06□□□□□ -1.76
CCDC188H7C350 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC188H7C350 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC188H7C350 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC188H7C350 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC188H7C350 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC188H7C350 HSPA8P1-201ENST00000425843 1833 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC188H7C350 OR4A15-201ENST00000314706 1035 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 RNA5SP447-201ENST00000363749 119 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC188H7C350 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC188H7C350 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCDC188H7C350 MT-TC-201ENST00000387405 66 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 FCF1P2-201ENST00000415284 583 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC188H7C350 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC188H7C350 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 RPS29P33-201ENST00000456717 146 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 AC018635.1-201ENST00000468292 1030 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC188H7C350 AL132838.2-201ENST00000492041 314 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC188H7C350 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC188H7C350 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC188H7C350 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC188H7C350 RAB9BP1-201ENST00000519581 626 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 ARL2BPP5-201ENST00000523141 481 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC188H7C350 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC188H7C350 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC188H7C350 MTCYBP27-201ENST00000555160 670 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 AL121576.1-201ENST00000556055 276 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 MIR4509-3-201ENST00000578671 94 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC188H7C350 MIR4509-2-201ENST00000583920 94 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 MIR4715-201ENST00000584117 79 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 AC006116.5-201ENST00000591936 559 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 BNIP3P39-201ENST00000601077 554 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC188H7C350 AC092953.2-201ENST00000608000 699 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 AC092954.1-201ENST00000609121 445 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 MIR4509-1-201ENST00000618224 94 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 AL731566.2-201ENST00000618971 317 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 AC104985.3-201ENST00000623479 597 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC188H7C350 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC188H7C350 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC188H7C350 PABPC1P7-201ENST00000413177 1513 ntBASIC4.05□□□□□ -1.76
CCDC188H7C350 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC188H7C350 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC188H7C350 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC188H7C350 SEPT7P7-201ENST00000420492 1301 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC188H7C350 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC188H7C350 RNU6-492P-201ENST00000363035 104 ntBASIC4.04□□□□□ -1.76
CCDC188H7C350 RNU6-707P-201ENST00000364647 95 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms