Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SCARNA20.6-201ENST00000517251 106 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 TBCA-206ENST00000518338 551 ntTSL 2 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC010476.1-201ENST00000519111 851 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 IGKV2D-10-201ENST00000520194 281 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 BRD9P1-201ENST00000529855 560 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 MIR4271-201ENST00000582451 67 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 MIR4737-201ENST00000583979 81 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 RPL23AP78-201ENST00000599928 470 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC015726.1-201ENST00000602353 681 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC008962.1-201ENST00000605729 304 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC083964.1-201ENST00000607549 630 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AL161734.1-201ENST00000609720 557 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 VIS1.1-201ENST00000610517 203 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC008083.4-201ENST00000615076 444 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC009464.1-201ENST00000615731 469 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AP004607.9-201ENST00000618202 316 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC069209.1-201ENST00000619282 651 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 SNORD39.4-201ENST00000620099 78 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC007275.1-201ENST00000621243 671 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC079684.1-201ENST00000621405 437 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC026124.2-201ENST00000621847 656 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC119674.1-212ENST00000641155 993 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 MFSD8-233ENST00000641482 4860 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 ZNF271P-202ENST00000465539 1970 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC073429.2-201ENST00000569694 1444 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 RPL23AP57-201ENST00000332361 466 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 RNU6-50P-201ENST00000362356 103 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 SNORA62-201ENST00000365493 153 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 SNORA70F-201ENST00000384142 135 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 MIR181B1-201ENST00000385240 110 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 SNORA17A-201ENST00000391185 133 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AC092447.6-201ENST00000414578 210 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AC006065.1-201ENST00000422539 802 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AL139247.1-201ENST00000422768 325 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 ELOCP13-201ENST00000443934 329 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 RPS24P6-201ENST00000452670 400 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AC091153.1-201ENST00000466297 402 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AC022034.3-201ENST00000471393 478 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 MTND3P6-201ENST00000485242 339 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 RN7SKP40-201ENST00000517211 242 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 RAB9BP1-201ENST00000519581 626 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AP003385.6-201ENST00000531603 374 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 MIR5194-201ENST00000582634 120 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AC245036.5-201ENST00000596330 847 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AL392112.1-201ENST00000605115 829 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 uc_338.1-201ENST00000612113 180 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 NAA60-237ENST00000615865 326 ntTSL 5 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AC140725.3-201ENST00000616193 880 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 HTR1DP1-201ENST00000616500 888 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AL356490.1-201ENST00000623079 479 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 SNORA17.5-201ENST00000630429 132 ntBASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
CHKB-CPT1BH3BT56 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AL672167.1-206ENST00000356293 943 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 DEFA7P-201ENST00000382676 285 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 SNORA51.8-201ENST00000384234 132 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 RPS29P17-201ENST00000430795 166 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms