Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SNX9Q9Y5X1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
SNX9Q9Y5X1 ERCC6-202ENST00000374127 1782 ntBASIC4.4□□□□□ -1.7
SNX9Q9Y5X1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
SNX9Q9Y5X1 OR5H2-201ENST00000355273 945 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 MIR372-201ENST00000362225 67 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 SNORD116-2-201ENST00000384274 95 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 SNORD116-6-201ENST00000384711 96 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 MIR3074-201ENST00000384885 81 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AL590084.1-201ENST00000407885 387 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 RNU6-77P-201ENST00000410554 91 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 MTND4P22-201ENST00000413116 1169 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 OR5AW1P-201ENST00000426334 1006 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AC092017.2-201ENST00000427600 362 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 NANOGP6-201ENST00000429190 847 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AC234064.1-201ENST00000436312 247 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 COX7BP2-201ENST00000437976 242 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 FGF7P5-201ENST00000441829 291 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 RPS4XP4-201ENST00000443195 763 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 OR6K5P-201ENST00000447050 945 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 RPL36AP13-201ENST00000457490 317 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 RPL7P1-201ENST00000468161 747 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 RPL7P9-201ENST00000468715 747 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AC073522.1-201ENST00000483312 377 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AC104687.1-201ENST00000485829 412 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AC111193.1-201ENST00000504097 155 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 PPBPP1-201ENST00000510807 373 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 KRT19P6-201ENST00000510983 209 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 RNU5A-4P-201ENST00000516588 111 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 RPL23AP87-202ENST00000573039 466 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 MIR3160-1-201ENST00000577972 85 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AP000238.1-201ENST00000608759 426 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AC090246.1-201ENST00000616499 426 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 MIR4727-201ENST00000622232 55 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 MIR1322-201ENST00000638013 71 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AL136964.1-201ENST00000622038 2990 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 AL031985.3-201ENST00000565390 2449 ntBASIC4.4□□□□□ -1.71
SNX9Q9Y5X1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 RNA5SP515-201ENST00000364570 118 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 RNU6-707P-201ENST00000364647 95 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 OR1L1-202ENST00000373686 1083 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AL590290.1-201ENST00000405336 380 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 RPL21P65-201ENST00000406094 466 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 MIR1303-201ENST00000408625 86 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 HSPE1P12-201ENST00000412576 301 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 TPT1P2-201ENST00000413105 503 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 HSFY6P-201ENST00000445573 403 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 EXTL2P1-201ENST00000446218 416 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 RAD23BP3-201ENST00000454157 1152 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 TRBV8-2-201ENST00000475637 270 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AL132838.2-201ENST00000492041 314 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 RPL29P14-201ENST00000495837 428 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 IGJP1-201ENST00000522682 475 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AC022662.1-201ENST00000580252 331 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 MIR5684-201ENST00000585074 65 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 AC115085.1-201ENST00000588924 229 ntBASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX9Q9Y5X1 VN1R88P-201ENST00000596787 292 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms