Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB4Q9Y5E5 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHB4Q9Y5E5 CASC19-280ENST00000642102 1351 ntBASIC5.37□□□□□ -1.55
PCDHB4Q9Y5E5 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB4Q9Y5E5 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PCDHB4Q9Y5E5 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB4Q9Y5E5 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB4Q9Y5E5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PCDHB4Q9Y5E5 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 CASC19-204ENST00000641001 2055 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AP000542.2-201ENST00000623199 6179 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 Y_RNA.38-201ENST00000362617 102 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 MT-TL1-201ENST00000386347 75 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC013442.1-201ENST00000397347 228 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 SNRPEP2-201ENST00000397592 279 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 RNU4-55P-201ENST00000410731 137 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 MTCO1P17-201ENST00000411522 491 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC234782.4-201ENST00000417646 1048 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 LSM1P1-201ENST00000438629 273 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 RPS29P9-201ENST00000440360 171 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 MTCO1P27-201ENST00000448269 226 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 RN7SL799P-201ENST00000475891 298 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 RN7SL177P-201ENST00000476596 299 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC008628.2-201ENST00000502605 298 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC009646.1-201ENST00000510455 318 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC004980.4-201ENST00000513375 203 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 OR5AP1P-201ENST00000529730 940 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 HMGB1P33-201ENST00000563485 527 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AL391840.1-201ENST00000571144 367 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC022916.3-201ENST00000592961 742 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC008687.2-201ENST00000597865 520 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 BNIP3P9-201ENST00000603714 553 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AL139286.1-201ENST00000604465 483 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC008277.2-201ENST00000605196 797 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AL627230.1-201ENST00000613077 211 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 MLECP1-201ENST00000615893 709 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AL591926.8-201ENST00000616876 211 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 MTND4P12-201ENST00000498999 1377 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 RLIMP2-201ENST00000427891 1563 ntBASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB4Q9Y5E5 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 RN7SKP285-201ENST00000410137 318 ntBASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 Y_RNA.608-201ENST00000410647 95 ntBASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 RNU2-22P-201ENST00000411266 212 ntBASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 AC007738.1-201ENST00000413892 348 ntBASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 GJA6P-201ENST00000415117 1042 ntBASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 OR51A5P-201ENST00000415429 942 ntBASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 AC048351.1-201ENST00000420064 602 ntBASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 AC104333.2-201ENST00000422630 192 ntBASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.35□□□□□ -1.55
PCDHB4Q9Y5E5 TIMM9P3-201ENST00000428659 274 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms