Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 SNORA73.2-201ENST00000364946 201 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 RNU6-77P-201ENST00000410554 91 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AC019070.1-201ENST00000415008 1024 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AC241520.1-201ENST00000422654 1099 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AC011742.1-201ENST00000431448 434 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AL050321.1-201ENST00000432363 400 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 RPL23AP33-201ENST00000442301 452 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 RPS20P32-201ENST00000456044 356 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 RPL9P32-201ENST00000464118 620 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 RPL7L1P8-201ENST00000469911 741 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 RPS26P15-201ENST00000488067 348 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 SOD1P3-201ENST00000518682 454 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 NDUFA5P2-201ENST00000519723 344 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AC113192.3-201ENST00000529152 742 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AL136520.1-202ENST00000555494 763 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 VN1R88P-201ENST00000596787 292 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 SNORA51-201ENST00000606420 132 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AC073530.2-201ENST00000623987 261 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AL034408.1-202ENST00000636088 415 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 AC073055.1-201ENST00000456901 1621 ntBASIC3.55□□□□□ -1.84
NPIPA1Q9UND3 BDP1P-201ENST00000582658 1990 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 MTCO1P4-201ENST00000520516 1409 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 MTCO1P6-201ENST00000481192 1384 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 ZNF602P-201ENST00000405929 924 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 RNA5SP44-201ENST00000410446 133 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AC073264.1-201ENST00000411508 416 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 DEFB130D-201ENST00000426866 237 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 UBE2V1P1-201ENST00000430836 445 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AC006994.1-201ENST00000438212 839 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 RANP8-201ENST00000444720 713 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 GTF2IP12-201ENST00000456547 356 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AC016065.2-201ENST00000514530 444 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 HIGD1AP3-201ENST00000515857 278 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 IGJP1-201ENST00000522682 475 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 YPEL5P3-201ENST00000547227 352 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AC112503.1-201ENST00000608436 391 ntBASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
NPIPA1Q9UND3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 RNU6-1243P-201ENST00000364028 107 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 RNA5SP387-201ENST00000364226 106 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 SNORA70.4-201ENST00000365509 134 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 U8.11-201ENST00000384699 133 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 U8.12-201ENST00000384701 133 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 MIR7-3-201ENST00000384898 110 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms