Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MIR298-201ENST00000401212 88 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 U3.32-201ENST00000408116 212 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 SNORA77-201ENST00000408716 125 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 TMBIM7P-201ENST00000418074 855 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC073335.1-201ENST00000427776 363 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC004975.1-201ENST00000428733 208 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 ZYG11AP1-201ENST00000430329 837 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AL118496.1-201ENST00000440201 1812 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC005912.1-201ENST00000495392 255 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 MTCYBP18-201ENST00000501056 747 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AK3P4-201ENST00000504283 583 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC025465.4-201ENST00000513422 638 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 SNORA48.10-201ENST00000516965 160 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 CYCSP2-201ENST00000558168 301 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC141257.3-201ENST00000572906 215 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 MIR4277-201ENST00000578298 84 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 RN7SL690P-201ENST00000582087 240 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 UBE2V2P2-201ENST00000587677 504 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC005034.5-201ENST00000604219 466 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC112191.3-201ENST00000604371 277 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC007038.2-201ENST00000608095 740 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AP001521.2-201ENST00000608772 546 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC243756.2-201ENST00000618406 463 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC068880.5-201ENST00000624331 290 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 OR52H1-202ENST00000641796 1061 ntBASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM7Q9NR12 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC109446.4-201ENST00000623235 2755 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 RNU6-216P-201ENST00000363282 104 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 Y_RNA.573-201ENST00000384763 105 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 U8.14-201ENST00000390843 143 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AL450338.1-201ENST00000407987 512 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 MIR1193-201ENST00000408109 78 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 RPS3AP3-201ENST00000411933 242 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC083875.1-201ENST00000419509 405 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 COX6CP13-201ENST00000428703 226 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 RPS29P9-201ENST00000440360 171 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AL354714.3-201ENST00000447284 493 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 OR1H1P-201ENST00000448731 937 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 TCEA1P1-201ENST00000449716 880 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 SLC31A1P1-201ENST00000451221 567 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC005229.2-201ENST00000456995 399 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 RN7SL41P-201ENST00000476144 297 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 RN7SL809P-201ENST00000482040 297 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 RPS3AP14-201ENST00000483907 780 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 MTCO2P30-201ENST00000503662 364 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 MTND3P22-201ENST00000510932 243 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 MTND5P4-201ENST00000514978 288 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 RNU6-583P-201ENST00000516012 92 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AP001893.2-201ENST00000526949 202 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 MIR4715-201ENST00000584117 79 ntBASIC5.6□□□□□ -1.51
PDLIM7Q9NR12 AC008752.3-201ENST00000588113 712 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms