Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 HMGB1P5-201ENST00000255320 642 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 FAM3C2-201ENST00000312214 681 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 MIR383-201ENST00000362257 73 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 RNA5SP443-201ENST00000363083 132 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 RN7SKP44-201ENST00000363602 316 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 MIR92A2-201ENST00000385299 75 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AL161909.1-201ENST00000397390 712 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 RN7SKP182-201ENST00000410772 298 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 OR51A3P-201ENST00000413596 924 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 PTP4A1P5-201ENST00000420305 455 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 RPL7P53-201ENST00000421245 739 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 DPRXP1-201ENST00000426312 460 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 ATP5F1P1-201ENST00000433775 569 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 Z83846.1-201ENST00000446798 265 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 COX6CP18-201ENST00000448769 222 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC105137.1-201ENST00000484355 562 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 RPS3AP22-201ENST00000488297 769 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 CEACAMP10-202ENST00000495431 496 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 RPL31P61-201ENST00000496160 376 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC011352.3-201ENST00000505162 593 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC116353.3-201ENST00000511215 249 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 HIGD1AP5-201ENST00000529959 259 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC105233.3-201ENST00000531125 744 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC091515.1-201ENST00000548110 679 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 KPNA2P3-201ENST00000584190 848 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC110743.1-201ENST00000584870 478 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 Z94722.1-201ENST00000604328 474 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AL390816.3-201ENST00000604527 1066 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 MIR6758-201ENST00000620653 63 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AL773545.4-201ENST00000637262 310 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AL513478.4-201ENST00000641636 310 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 AC018555.1-201ENST00000567548 1980 ntBASIC4.25□□□□□ -1.73
PCDH9Q9HC56 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDH9Q9HC56 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 SNORD113-6-201ENST00000363345 75 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 RNA5SP513-201ENST00000364648 118 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 SNORD116-8-201ENST00000384365 95 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 SNORD65.1-201ENST00000390889 71 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AL356131.1-201ENST00000405826 414 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 RNU6-272P-201ENST00000411028 104 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 RNU2-6P-201ENST00000411404 190 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 RAP1BP1-201ENST00000412709 553 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 MTND4P22-201ENST00000413116 1169 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 PAICSP7-201ENST00000419829 962 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC011233.1-201ENST00000422812 283 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 RPL23AP38-201ENST00000423801 469 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 COX6B1P7-201ENST00000430845 235 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 BTF3P10-201ENST00000433415 495 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 PPIAP17-201ENST00000438507 471 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC004865.1-201ENST00000442276 1003 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AL133217.1-201ENST00000450980 425 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 ANKRD26P4-201ENST00000455755 950 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms