Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 RPL23AP16-201ENST00000441715 421 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 RPL23AP76-201ENST00000441860 458 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC098826.2-201ENST00000452011 651 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 MTCO3P2-201ENST00000457365 171 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC010301.1-201ENST00000473936 355 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 SAP18P1-201ENST00000512058 390 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC008837.2-201ENST00000513076 418 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 OR4A12P-201ENST00000530847 918 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC009097.3-201ENST00000563557 1018 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AL132657.2-201ENST00000564417 358 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 MIR4458-201ENST00000578872 75 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AL591034.3-201ENST00000605511 685 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AP000676.4-201ENST00000624659 623 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC135352.1-201ENST00000506173 1418 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 SEPT7P7-201ENST00000420492 1301 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC107982.1-201ENST00000507171 1300 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC067945.1-201ENST00000342609 618 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 Y_RNA.25-201ENST00000362528 102 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 RNU5D-1-201ENST00000363299 116 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 ENSAP1-201ENST00000392855 326 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 RNA5SP80-201ENST00000410475 111 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 RNU6-628P-201ENST00000410675 107 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 RPL23AP38-201ENST00000423801 469 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 SDCBPP2-201ENST00000424643 885 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 COX7BP2-201ENST00000437976 242 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 MTCO1P48-201ENST00000448024 1096 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 FGF7P3-201ENST00000454645 303 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC087385.1-201ENST00000475062 312 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC090013.1-201ENST00000485147 480 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 ACTG1P13-201ENST00000486987 1043 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 RPS6P4-201ENST00000494693 758 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 WBP1LP4-201ENST00000505043 344 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC034244.1-201ENST00000507687 207 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 RN7SKP31-201ENST00000516354 278 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 Y_RNA.717-201ENST00000517106 92 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 RN7SKP234-201ENST00000517173 224 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 ZNF705CP-201ENST00000530515 889 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 SNORD39.3-201ENST00000584451 71 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC007566.2-201ENST00000603642 413 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC010680.3-201ENST00000604215 520 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC009220.3-201ENST00000604318 586 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 HSPE1P14-201ENST00000605812 302 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AP003117.2-201ENST00000606010 545 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC091946.2-201ENST00000606105 291 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AL451074.6-201ENST00000608512 729 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC092954.1-201ENST00000609121 445 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC105429.2-201ENST00000610567 517 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC140725.3-201ENST00000616193 880 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 AC006065.6-201ENST00000625201 545 ntBASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR1BQ9H9Y6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms