Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 Y_RNA.67-201ENST00000362870 100 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 RNU6-1322P-201ENST00000364309 107 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 SNORA16A-201ENST00000384342 137 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 Z93019.1-201ENST00000416450 973 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AL035410.1-201ENST00000427409 427 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 HMGB3P10-201ENST00000434734 572 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AL031663.1-201ENST00000437445 219 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC083899.1-201ENST00000454465 3819 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 RPS15AP1-201ENST00000457423 391 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC007537.2-201ENST00000472093 511 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 UBA52P7-201ENST00000486088 380 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AL136038.1-201ENST00000497246 351 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC008562.1-201ENST00000521763 330 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC018638.8-201ENST00000588755 281 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 VN1R80P-201ENST00000597126 338 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC012616.1-201ENST00000600294 197 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AL133255.1-201ENST00000606374 441 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 RNU6-87P-201ENST00000607561 108 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AP006248.2-201ENST00000623309 592 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC025125.1-201ENST00000624743 1922 ntBASIC4.84□□□□□ -1.64
SEC61A2Q9H9S3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AL512646.1-201ENST00000269395 1077 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 Y_RNA.138-201ENST00000363462 102 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 PPIAP9-201ENST00000403866 498 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 RN7SKP229-201ENST00000410465 302 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 MTND3P17-201ENST00000416968 344 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AL353678.1-201ENST00000422735 741 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AL121776.1-201ENST00000429337 372 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 RPS26P39-201ENST00000469206 341 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 RN7SL184P-201ENST00000488308 297 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 UBA52P3-201ENST00000491303 382 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 KLRA1P-201ENST00000503499 986 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 SUMO2P4-201ENST00000504193 276 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC091912.1-201ENST00000511351 248 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 SCARNA16.4-201ENST00000516956 187 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC105029.1-201ENST00000520250 669 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 NRBF2P4-201ENST00000520874 850 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 BRD9P1-201ENST00000529855 560 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC008126.1-201ENST00000549019 480 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AL355375.2-201ENST00000574825 175 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 MIR4489-201ENST00000578869 62 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 MIR7853-201ENST00000584820 132 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC243960.4-201ENST00000600532 288 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC068790.5-201ENST00000602741 355 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AL445222.1-201ENST00000607259 628 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AL512624.1-201ENST00000613638 469 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC132068.1-201ENST00000623805 459 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC100810.6-201ENST00000638068 285 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AC003973.3-201ENST00000624863 2822 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 AL353796.1-201ENST00000561542 3241 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 242.1 ms