Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 CR381670.1-201ENST00000624291 1693 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 HSPA8P19-201ENST00000505359 1517 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 UBE2V1P15-201ENST00000407776 448 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AC105402.1-201ENST00000413336 545 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AC092832.1-201ENST00000422934 400 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 MTND4LP7-201ENST00000431728 294 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 MTCO3P20-201ENST00000454926 688 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AC090543.1-201ENST00000492168 485 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 RPL23AP73-201ENST00000492507 471 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AC012170.1-201ENST00000495139 359 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 CAB39P1-201ENST00000502277 460 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AC026333.2-201ENST00000542164 106 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AC023158.1-201ENST00000561632 1025 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AC141257.3-201ENST00000572906 215 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AL356490.1-201ENST00000623079 479 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 MIR3651-201ENST00000630427 90 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AC244205.2-202ENST00000635781 342 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AC068647.1-201ENST00000489539 2265 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 AL356274.2-201ENST00000624379 3752 ntBASIC3.72□□□□□ -1.81
NXF3Q9H4D5 DCAF13P3-201ENST00000561147 1334 ntBASIC3.71□□□□□ -1.81
NXF3Q9H4D5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
NXF3Q9H4D5 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 RNA5SP235-201ENST00000365411 114 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 RNU6-40P-201ENST00000384254 107 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 MIR124-3-201ENST00000384866 87 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 RSL24D1P1-201ENST00000404972 493 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AL138878.1-201ENST00000405131 347 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AL160175.1-201ENST00000428124 247 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AL691517.1-201ENST00000440833 1235 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 TPMTP4-201ENST00000450749 678 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 RPS3AP50-201ENST00000487064 803 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 RPL21P13-201ENST00000488305 481 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AC068305.1-201ENST00000497406 726 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 HMGB1P3-201ENST00000502802 616 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 FCF1P8-201ENST00000510322 597 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 SETP12-201ENST00000514068 805 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 LINC00557-201ENST00000563184 1279 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AP001180.3-201ENST00000582221 145 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AC079880.2-201ENST00000603790 1213 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 OR4H6P-202ENST00000603819 340 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AL355816.1-201ENST00000607951 118 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AL354976.1-201ENST00000613843 387 ntBASIC3.71□□□□□ -1.82
NXF3Q9H4D5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NXF3Q9H4D5 AC032011.1-201ENST00000611703 1549 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 SNORD51.1-201ENST00000365405 77 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AL391417.1-201ENST00000404100 426 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AL031663.1-201ENST00000437445 219 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 RPS29P31-201ENST00000446147 164 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 BTF3P5-201ENST00000457252 467 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AC026427.2-201ENST00000506228 536 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 SNORA74D-201ENST00000516404 141 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 IGKV2D-23-201ENST00000518179 286 ntBASIC3.7□□□□□ -1.82
NXF3Q9H4D5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.7□□□□□ -1.82
NXF3Q9H4D5 AC092851.1-201ENST00000535964 478 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms