Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC010680.4-201ENST00000605334 543 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC004972.1-201ENST00000623934 2209 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC025125.1-201ENST00000624743 1922 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM4Q9C037 MIR30E-201ENST00000362104 92 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 RNU6-304P-201ENST00000364855 107 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 RNA5SP107-201ENST00000411358 122 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 RPS7P15-201ENST00000415804 584 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 AL691447.1-201ENST00000419456 387 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 RNF19BPX-201ENST00000426224 625 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 AC073063.1-201ENST00000434352 607 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 RPL37P3-201ENST00000456825 293 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 RPL21P10-201ENST00000463521 490 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 RN7SL429P-201ENST00000479090 223 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 RN7SL489P-201ENST00000486185 223 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 RN7SL327P-201ENST00000488659 223 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 FCF1P3-201ENST00000496394 590 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM4Q9C037 AC069306.1-201ENST00000507006 843 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 AP005205.1-201ENST00000563503 508 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 PSMA6P4-201ENST00000603247 718 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 AC034236.3-201ENST00000605999 461 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 RN7SL853P-201ENST00000617250 223 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 AC243312.2-201ENST00000623340 601 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 AF001550.2-201ENST00000636643 217 ntBASIC3.55□□□□□ -1.84
TRIM4Q9C037 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM4Q9C037 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM4Q9C037 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM4Q9C037 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
TRIM4Q9C037 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM4Q9C037 RNU6-225P-201ENST00000384613 103 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 SNORA48.5-201ENST00000391143 135 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 MIR1289-1-201ENST00000408836 144 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 RN7SKP284-201ENST00000411002 343 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC245291.1-201ENST00000419501 328 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 GLRXP1-201ENST00000423261 334 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 AL512649.1-201ENST00000428997 581 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 RPL23AP22-201ENST00000437556 453 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 HMGB3P30-201ENST00000457863 606 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 RNU6-1218P-201ENST00000458990 108 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 AL133162.1-201ENST00000463228 453 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC025518.1-201ENST00000479856 347 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC011037.1-201ENST00000483964 558 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC010627.1-201ENST00000503819 1294 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 RNA5SP385-201ENST00000515947 110 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC004024.1-201ENST00000549244 247 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC010198.2-201ENST00000550612 259 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 KLKP1-201ENST00000595979 403 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 AL589935.2-201ENST00000616471 1231 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 AC117529.2-201ENST00000512159 2068 ntBASIC3.54□□□□□ -1.84
TRIM4Q9C037 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM4Q9C037 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM4Q9C037 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM4Q9C037 ANKRD36P1-201ENST00000344424 659 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 SNORA38.1-201ENST00000364172 131 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 RNA5SP51-201ENST00000364750 119 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 MIR92A2-201ENST00000385299 75 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 RNU6-233P-201ENST00000410845 141 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 GTF2IP23-201ENST00000423746 351 ntBASIC3.53□□□□□ -1.84
TRIM4Q9C037 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM4Q9C037 HIGD1AP12-201ENST00000427832 281 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms